Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2164 ATGGCTGTGTCCAACGGCGTCGAAGCAGTGTTAGAGTTTCTGCGCAAGAATGGGTTGTCGGAAGCTGAGTCCGCGCTCCGAGAAGACATCATGGAGAATACCGACCTCGGAAACTTCGACTACGAGAAGTTCTTCTTCCCCATGGTCCCGCCTCCGCCGCCGGTCAGAGTCCGATCATTCTCCCGCCCCTCCGAGCTCGCCGCCGGTGACTGCTCCAAATCTAGCTCCGATGAGTTCGTCAGCATCGGTTCCCCCGCTTCTCGTGTTTCATCTTCAGAATTCATAAATCCATATGGAATCCGTTCTGCATCTCAGACTCAGAATGATTCTGAATCTTCGTCTGAAAGATTATCTCAGTTTGGCACAGCACGTGATTATCATGATTTTGATATGCAGAATGAACCGTATTGGTATAATGAAAAAGATGATGACTATTTCATGACTCCTAGTTTTGAAGGGCCGGATTTCTTTGCATGTCAAAGTGAAGATAAGTTTGTCATGACAGCAGAAAAGGAGTATAAGCATGACAATTCTCTGGACCTTGTTTACAACTATAAAGAATTTAAATTAGAGGGAAATAGTAATGGTGGTTACATGGACAAGGCATGCCTTTATAATCATTCCTCGGTAGGGGATGGAAATGTAACTTATTCAAAAGGGTATTGTCATGCTGATAACAACAACCAGTTTGAAGGGGAATTAGAGGGCAGGGCCGAGAAACACAATGTTGCCTGTAGTTGTGAAGTTCCATTTTGCAAAAGCAGTCCAGGTTCAGGAGGTTCTTGCAGTTTGGATCCTACAAACTTTGTCTACCCTAATTTGAAGGAAATCAATCTGAATGATTTTCATCTGAAAGTTGTTGGGGACATTAACTCTTTTGACTCTACTTCAGAGCTAACCGTGAATCAAAGTTTTGACTACTGCACTAAAAATGACAGCAGTAAGCAATACAATGGTCCCTATGACTTAACTATCAAAGTTACTGAAAAAGATCTACCAAATGGACATGACAAGATCTGGGATGGTGGAGAATTAGCTGAAGAGTGCCAAGATCCAGAGATTACTGCAGATGGAGAGGATACTACTGATGATGAGCTCTCAAAGTATACTCAAGAGGAAGAATACGAAGTATTTGATCTGAGAATTATACATAGAAAGAACAGGACTGGATTTGAAGAAAACAAGGAACTGCCCATTGTGCTAAATACAGTCTTGGCTGGAAGGTATTATGTAACAGAATATCTTGGTTCAGCTGCCTTCAGTAGGGTTGTTCAGGCACATGATCTTCAGACAGGAATAGATGTTTGCTTGAAGATTATTAAAAACGACAAAGACTTTTTTGATCAAAGCTTAGATGAAATCAAGCTTCTGAAACTTGTCAATAAGCACGACCCAGCAGATCAACACCACATTTTGCGCCTTTATGACTATTTCTACCATCAGGAGCATTTATTCATTGTAACTGAACTTCTGCGAGCAAACTTATACGAATTTCAGAAGTTCAACCAAGAATCTGGAGAGGAAGAATATTTTACGTTGAACAGATTGCAGCTCATTACTCGCCAGTGTTTGGAAGCATTGCAATACTTGCATAGCTTGGGAATTGTTCACTGTGACCTGAAGCCAGAAAACATTTTAATCAAAAGTTACAGAAGATCTGAGATAAAGGTTATTGATCTTGGAAGCAGTTGCTTCCAAACAGACAATCTGTGTCTATATGTACAATCCCGATCCTATAGAGCTCCTGAAGTGATGTTGGGCCTTCAATATGATGAAAAGATTGACATATGGTCTCTCGGCTGTATCTTGGCAGAGTTATGCTCTGGTGAAGTGCTGTTTCCAAATGATGCAGTTGTGATGATTCTGGCACGCATGATTGGAATGCTTGGTTCTATTGACATGGAGATGTTGGTAAAAGGGCAAGAAACGCACAAGTACTTCACCAAAGAGTATGATATCTATTATGTAAATGAGGATACTGATCAACTGGAGTACATAATTCCAGAAGAGTCATCATTGGAGCAACACCTACAAGTCACTGATACTATGTTTATGGACTTTGTTAGATACTTACTTAGCATCAACCCCAAAAGAAGGCCTACTGCAAAACAAGCACTAAGGCATCCATGGCTTTCCTATGTTTACTAG 2148 0.4111 MAVSNGVEAVLEFLRKNGLSEAESALREDIMENTDLGNFDYEKFFFPMVPPPPPVRVRSFSRPSELAAGDCSKSSSDEFVSIGSPASRVSSSEFINPYGIRSASQTQNDSESSSERLSQFGTARDYHDFDMQNEPYWYNEKDDDYFMTPSFEGPDFFACQSEDKFVMTAEKEYKHDNSLDLVYNYKEFKLEGNSNGGYMDKACLYNHSSVGDGNVTYSKGYCHADNNNQFEGELEGRAEKHNVACSCEVPFCKSSPGSGGSCSLDPTNFVYPNLKEINLNDFHLKVVGDINSFDSTSELTVNQSFDYCTKNDSSKQYNGPYDLTIKVTEKDLPNGHDKIWDGGELAEECQDPEITADGEDTTDDELSKYTQEEEYEVFDLRIIHRKNRTGFEENKELPIVLNTVLAGRYYVTEYLGSAAFSRVVQAHDLQTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPADQHHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGEEEYFTLNRLQLITRQCLEALQYLHSLGIVHCDLKPENILIKSYRRSEIKVIDLGSSCFQTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARMIGMLGSIDMEMLVKGQETHKYFTKEYDIYYVNEDTDQLEYIIPEESSLEQHLQVTDTMFMDFVRYLLSINPKRRPTAKQALRHPWLSYVY 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2164 715 SMART serkin_6 409 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2164 715 CDD PKc_DYRK_like 409 711 - -
Aed3g2164 715 ProSiteProfiles Protein kinase domain profile. 409 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2164 715 PANTHER HYPOTHETICAL SER-THR PROTEIN KINASE-RELATED 8 715 - -
Aed3g2164 715 Gene3D Transferase(Phosphotransferase) domain 1 463 711 - -
Aed3g2164 715 PANTHER DUAL SPECIFICITY PROTEIN KINASE 8 715 - -
Aed3g2164 715 Pfam Protein kinase domain 411 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2164 715 Gene3D Phosphorylase Kinase; domain 1 404 490 - -
Aed3g2164 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Aed3g2164 715 SUPERFAMILY Protein kinase-like (PK-like) 398 712 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2164 Aed-Chr3 25312641 25318368 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2164 406 706 MAP Kinase Gene Family AT5G19010 31.776 4.47e-34 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Aed3g2164 Pkinase 1.7e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2164 - - gmx:100783988 1301.96