Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2157 ATGGCATCTCTCATCATCACATCACTCTTCCTTCTTTTCATCTCCGCCGTCCTCCTCTTCCTCCACCGCCGATCCCGCTACCGTGGGCTCCGTACTCCTCCGGGGACGCTCGGGCTCCCCTTCGTCGGCGAAACCTTACAGCTCATATCAGCCTACAAGAGCGACAATCCAGAGCCCTTCATGGACGAGCGCGTGAAACGCCACGGTCCAATCTTCACGACCCACGTGTTCGGCGAACCAACCGTGTTCTCGGCCGACCCGGAAACGAACCGGTTCATCTTGCTGAACGAAGGGAAGCTCTTCGATTGTAGCTACCCCGGTTCGATATCGAACCTCCTCGGGAAACACTCTCTGCTCCTTATGAAAGGTTCTCTCCACAAGAGAATGCACTCACTCACTATGAGCTTCGCCAACTCCTCCATCATCAAAGACCATTTACTCCTCGACATAGACCGCCTCATCCGCCTCAACCTCGATTCCTGGTCTGACCGGATTCTCCTCATGGAAGAAGCCAAGAAGATAACGTTTGAGTTGACAGTGAAGCAGCTGATGAGCTTTGATCCAGATGAATGGACCGAGACTCTAAGAAAAGAGTACGTGCTTGTGATTGAAGGATTTTTTTCAGTCCCCTTCCCTCTCTTCTCAAGTACCTACCGCAGAGCCATCAAGGCTAGGACGAAGGTGGCAGAGGCATTAACATTGGTAGTGAGGGAGAGAAGAAAAGAGAGCGAATCGGGGGAGAAAAAGAATGACATGCTAGGAGCATTGTTGGCCTCCGGCTACCAATTTTCCGACGAGGAAATAGTGGATTTTATGTTGGCTTTGCTCGTTGCTGGCTATGAAACCACCTCAACAATAATGACTCTTGCCGTCAAGTTCCTCACAGAGACTCCTCTAGCATTGGCACAACTCAAGGAAGAGCATGATCAAATCAGAGCCAAGAAGAGTTGCCCAGAGGCACCACTGGAGTGGACAGATTATAAGTCAATGGCATTTACTCAATGTGTTGTGAATGAGACTTTGAGGGTGGCAAACATAATTGGTGCGATATTTAGGAGAGCAATGACAGACATCAACATTAAAGGTTACACTATACCAAAGGGATGGAGGGTTGTTGCTTCATTTCGTGCGGTGCATCTAAACCCTGAGCATTACAAAGATGCTCGCACCTTCAATCCATGGAGATGGGAGCAGAGTAAGTCAGAAGCAAGTAGCCCTGGGAATGTATATACCCCTTTTGGAGGAGGGCCACGTATGTGCCCTGGGTATGAGCTTGCCAGAGTCGTGCTCTCTGTCTTCCTTCACCGCATTGTCACCCGTTATAGTTGGGTTCCTGCAGAAGAAGATAAGTTGGTGTTTTTCCCAACCACTAGGACGCAGAAGAGGTATCCTATCATAGTCAAGCGTAGAGAGGAGTCCATATTGACTAAGTAA 1434 0.4944 MASLIITSLFLLFISAVLLFLHRRSRYRGLRTPPGTLGLPFVGETLQLISAYKSDNPEPFMDERVKRHGPIFTTHVFGEPTVFSADPETNRFILLNEGKLFDCSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIKDHLLLDIDRLIRLNLDSWSDRILLMEEAKKITFELTVKQLMSFDPDEWTETLRKEYVLVIEGFFSVPFPLFSSTYRRAIKARTKVAEALTLVVRERRKESESGEKKNDMLGALLASGYQFSDEEIVDFMLALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDQIRAKKSCPEAPLEWTDYKSMAFTQCVVNETLRVANIIGAIFRRAMTDINIKGYTIPKGWRVVASFRAVHLNPEHYKDARTFNPWRWEQSKSEASSPGNVYTPFGGGPRMCPGYELARVVLSVFLHRIVTRYSWVPAEEDKLVFFPTTRTQKRYPIIVKRREESILTK 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2157 477 Pfam Cytochrome P450 207 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2157 477 Pfam Cytochrome P450 33 134 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2157 477 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2157 477 PRINTS P450 superfamily signature 278 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2157 477 PRINTS P450 superfamily signature 335 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2157 477 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2157 477 PANTHER CYTOCHROME P450 26 9 469 - -
Aed3g2157 477 PANTHER CYTOCHROME P450 90A1 9 469 - -
Aed3g2157 477 Gene3D Cytochrome P450 22 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2157 477 PRINTS E-class P450 group I signature 334 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2157 477 PRINTS E-class P450 group I signature 374 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2157 477 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2157 477 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2157 477 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2157 477 PRINTS E-class P450 group I signature 287 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2157 477 PRINTS E-class P450 group I signature 267 284 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g2157 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Aed3g2157 477 SUPERFAMILY Cytochrome P450 25 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2157 Aed-Chr3 25260948 25267999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2157 121 471 Cytochrome P450 AT5G05690 80.114 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2157 K09588 - gmx:100775886 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2157 3 25260948 25267999 Aed3g2157 3 25260948 25267999 ECH
Aed7g2060 7 23307653 23317678 Aed3g2157 3 25260948 25267999 PCT