Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2146 ATGGCGGGGAAAGTGGCGAAGGCAGCTTACGATGCAAAGATGCTGAGGCTTCTGAGAGAATACAGTCAGGTGCTGGTGGTTTCATCGGACAACGTGGGTTCCAACCAGCTTCAGGGTATACGGAGGGGACTTAACTCTGATTCAGTGGTGGTGATGGGAAAGAACTCCATGATGAAACGCTCTATCATCTTGGATTCTCAGAAGACCGGCAACAAGGCATTCCTTAACCTTGTTCCCCTTCTTGTGGGAAATGTGGCTTTGATTTTCACCAAGGGTGATTTGAGGGAGGTTAGCGAACAAATTGCCAAGTACAAGGTTGTTCAACCTATTCTCATATGCCCCAAGTACACCTCGTATGACACATACCATAATTGCTCCTATATGCAATCTGGACAAGTACCTTTGGGTCTCACATGTTGTAATCAGCAGTCTTCGCAGGCCTCTGAGCCTTTTCTTGTATGTTCAAAATTCTTGCCACACCAACATTGTTTCTTGATGAGATCAAGACAGTTCTTGATGACAAGTATATGGTCTCCTCTTCTCCTGTTGGCTGGTAACTTGTAA 564 0.4557 MAGKVAKAAYDAKMLRLLREYSQVLVVSSDNVGSNQLQGIRRGLNSDSVVVMGKNSMMKRSIILDSQKTGNKAFLNLVPLLVGNVALIFTKGDLREVSEQIAKYKVVQPILICPKYTSYDTYHNCSYMQSGQVPLGLTCCNQQSSQASEPFLVCSKFLPHQHCFLMRSRQFLMTSIWSPLLLLAGNL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2146 187 PANTHER RIBOSOMAL PROTEIN L10P-RELATED 1 186 - -
Aed3g2146 187 Pfam Ribosomal protein L10 6 104 IPR001790 -
Aed3g2146 187 Gene3D - 3 126 IPR043141 -
Aed3g2146 187 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 186 - -
Aed3g2146 187 SUPERFAMILY Ribosomal protein L10-like 7 105 IPR043141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2146 Aed-Chr3 25194075 25196844 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2146 1 156 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 49.412 2.80e-45 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2146 K02941 - mnt:21409050 159.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2146 3 25194075 25196844 Aed3g2146 3 25194075 25196844 ECH