Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2123 ATGAAGAAGCCCAATGGAATGGGCCGTGCAGAAAACCCTAGCTGGCCCGCTCCGTTTGACTGGGTTGTCTATAAGAACCCCGAAACTAATGTAGTTCCTCCTTCCGCCGAGCATAGAAGAGAAAAGGAGGAGGAGGAGGCTTCACCGTTACCAACCATGGTTAAAGGGCGTCAAGGAGAGCGTGTTAGGCTTTACGTCAGGGGTTCAATTCTCGGATATAAGAGGTCCAAGTCAAACCAGTATCCAAACACCTCTCTTATCCAGATTGAGAATGTAAACACCAAGGAAGAAGTTGCGTGGTACGCTGGGAAGCGCATGGCTTACATTTACAAAGCCAAGGTAAAGACGAACGGAAGCCACTATCGCTGCATTTGGGGTAAGGTCATAAGGCCTCATGGTAACAGTGGTGTAGTGAGAGCCAAGTTCAAGTCCAATTTGCCACCCAGATCAATGATTCTCAGGACTCGTGGGGCTTGTTTGTCAGGCTCTTGA 492 0.4898 MKKPNGMGRAENPSWPAPFDWVVYKNPETNVVPPSAEHRREKEEEEASPLPTMVKGRQGERVRLYVRGSILGYKRSKSNQYPNTSLIQIENVNTKEEVAWYAGKRMAYIYKAKVKTNGSHYRCIWGKVIRPHGNSGVVRAKFKSNLPPRSMILRTRGACLSGS 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2123 163 MobiDBLite consensus disorder prediction 34 50 - -
Aed3g2123 163 PANTHER 60S RIBOSOMAL PROTEIN L35A 53 156 IPR001780 GO:0003735|GO:0005840|GO:0006412
Aed3g2123 163 MobiDBLite consensus disorder prediction 30 51 - -
Aed3g2123 163 Pfam Ribosomal protein L35Ae 64 151 IPR001780 GO:0003735|GO:0005840|GO:0006412
Aed3g2123 163 PANTHER - 53 156 - -
Aed3g2123 163 ProSitePatterns Ribosomal protein L35Ae signature. 126 147 IPR018266 GO:0003735|GO:0005840|GO:0006412
Aed3g2123 163 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 66 158 IPR001780 GO:0003735|GO:0005840|GO:0006412
Aed3g2123 163 SUPERFAMILY Translation proteins 64 151 IPR009000 -
Aed3g2123 163 Gene3D translation elongation factor selb, chain A, domain 4 58 156 IPR038661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2123 Aed-Chr3 25062777 25065616 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2123 53 156 Cytoplasmic Ribosomal Protein Gene Family AT1G74270 86.538 1.72e-62 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2123 K02917 - gmx:100305997 200.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2123 3 25062777 25065616 Aed3g2123 3 25062777 25065616 ECH