Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2110 ATGACTGGATCGAATGGCCAGTGGGCAGTGTTATTGGATTTTTTCTACAAGAACTTCAATGCATTCGTTATGAAGTTAACAGAAGAGGAGGCACAAAGGATGGCAGAAATGGACAACGTTATCTCTGTTTTTCCAAACACCAAGAATCGTGTTCACACAACAAGGTCGTGGAACTTCTTAGACTTTCCCGAGAATGTTCAAAGAGCAACCGCAGGCGTAGAGAGTGACATAATTGTGGGAGTGATAGACACCGGAATTTGGCCCGAGTCTGAGAGCTTCAGTGACAAAGGATTCGGTCCTCCACCAATCAGATGGAAAGGATCATGTCATAACTTTACCTGCAACAACAAGATAATCGGCGCAAAGTACTTTAATCTGGAACGTGAATTTGCGAAAGAAGATATCATATCAGCAAGAGATGCACAAGGGCACGGATCACACTGTGCATCCACAGTTGCTGGAAACTCAGTGAACTCTGCAAGTCTATTCGGGTTGGGCTCCGGTACTGCCCGTGGAGGAGTTCCGTCTGCCCGAATTGCTGTCTACAAAGTGTGTTGGAGAACAGGGGACTGTTCTGATGCTGACACCCTTGCAGCATTTGATGAAGCTATCAGTGATGGAGTTGACATTATTTCTATTTCAACCGGCTCCGGTGCCATAGTACACATTCCTTATTTTCATGATTCTAATAACATAGGAAGTTTCCATGCAATGAAAAAAGGGATATTAACCTCTAATTCTGCTAATAATTTGGGCCCTTCTCTTTCCTCTATGACAAATTATCCACCATGGTTGCTTTCTGTGGCTGCTAGCACCCTTGACAGAAAGATTGTTACCAAGGTGCAATTGGGCAATGGGGCTATTTATGAGGGGGTTTCAATTAACACATTTGATCTTAAGAAAAAATTGTATCCACTGGTTTACGGTGGAGATATACCTAACATTGCTGGTGGACACAACAGCTCCACATCCAGGTATTGCTTAGAGGAGTCTTTGGATAAACATTCAGTGAAGGGAAAGATTGTTGTGTGTGACCTTCTTCAGAATTCTGACGACGTGGGGATATTATCTGGGGCAGTTGGAGTTATATTTGGAATTAATTACCCTCAAGATTTGCCTGAAGCATATGCTCTGCCTGCTGTGCAAATTGCTCTTTGGGATCAAAGACTCATACATTCTTACATTACTTCAACCAGGTTAAATATTTGCTCTGATTTTGGAATTCTTGTTGTTATTGCTAACACAATCTTTGTTCTACCTATCACTAGAAATGCAACAGCCACGATATTTAGGAGTGAAGAAATAAACGATGGGCTAATGCCTTTCATAGGTTCATTCTCATCAAGAGGTCCAAATCCAATCACACCAAATACCCTAAAGCCTGACATTGCTGCTCCCGGAGTTGAAGTTATAGCTGCATGGTCTCCAATCTATCCAATTTCAGAATTTGAGGGTGACAAAAGAGCAGTACAATACAATATAATATCTGGCACTTCAATGGCTTGTCCTCATGCATCTGCAGCAGCTGCATATGTCAAATCATTTCACCCTAATTGGTCTCCTGCTATGATCAAGTCTGCGTTGATGACCACCGCAACTCCAATGAGTCCTAGTCTTAATCCTGAAGCTGAATTTGCATATGGAGCGGGGCTAATTAATCCTGCTAAGGCCACAAATCCTGGTTTAGTATATGATATTAGCGAAGCAGATTATATAAAATTCTTATGTGGAGAGGGATATACAGATAAAGAGCTTCGAATCCTCACTAAAGATCATAGCAGTTGCAAAGGACATGCTAACAAGAAAGCTGTATACGAATTAAACCTTCCATCATTTGCTCTTTCTATAAATGGCTCTGATTTTAGTCGTGCTTACCATAGAACAGTTACAAATGTGGGATCAGCAACATCTACTTATAAAGCCAAAGTAATTGCTCCACCTTTGTTCAATATTAAAGTGAAACCTAGTACTCTTTCCTTTACATCTATAGGGCAGAAAAAGTCATTTTACGTCATAATTGAAGGGATCAATATTAACGTGCAAATAATCTCTGCTTCTTTCATTTGGGATGATGGCAAGCATCAAGTTAGAAGTCCAATTGTAGTCTATGGGTAA 2115 0.4095 MTGSNGQWAVLLDFFYKNFNAFVMKLTEEEAQRMAEMDNVISVFPNTKNRVHTTRSWNFLDFPENVQRATAGVESDIIVGVIDTGIWPESESFSDKGFGPPPIRWKGSCHNFTCNNKIIGAKYFNLEREFAKEDIISARDAQGHGSHCASTVAGNSVNSASLFGLGSGTARGGVPSARIAVYKVCWRTGDCSDADTLAAFDEAISDGVDIISISTGSGAIVHIPYFHDSNNIGSFHAMKKGILTSNSANNLGPSLSSMTNYPPWLLSVAASTLDRKIVTKVQLGNGAIYEGVSINTFDLKKKLYPLVYGGDIPNIAGGHNSSTSRYCLEESLDKHSVKGKIVVCDLLQNSDDVGILSGAVGVIFGINYPQDLPEAYALPAVQIALWDQRLIHSYITSTRLNICSDFGILVVIANTIFVLPITRNATATIFRSEEINDGLMPFIGSFSSRGPNPITPNTLKPDIAAPGVEVIAAWSPIYPISEFEGDKRAVQYNIISGTSMACPHASAAAAYVKSFHPNWSPAMIKSALMTTATPMSPSLNPEAEFAYGAGLINPAKATNPGLVYDISEADYIKFLCGEGYTDKELRILTKDHSSCKGHANKKAVYELNLPSFALSINGSDFSRAYHRTVTNVGSATSTYKAKVIAPPLFNIKVKPSTLSFTSIGQKKSFYVIIEGININVQIISASFIWDDGKHQVRSPIVVYG 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2110 704 Gene3D - 274 436 - -
Aed3g2110 704 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 52 IPR037045 -
Aed3g2110 704 Pfam Subtilase family 75 550 IPR000209 GO:0006508|GO:0008236
Aed3g2110 704 ProSitePatterns Serine proteases, subtilase family, serine active site. 497 507 IPR023828 -
Aed3g2110 704 SUPERFAMILY Subtilisin-like 51 562 IPR036852 GO:0004252|GO:0006508
Aed3g2110 704 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 5 702 IPR045051 -
Aed3g2110 704 PRINTS Subtilisin serine protease family (S8) signature 496 512 IPR015500 -
Aed3g2110 704 PRINTS Subtilisin serine protease family (S8) signature 140 153 IPR015500 -
Aed3g2110 704 PRINTS Subtilisin serine protease family (S8) signature 74 93 IPR015500 -
Aed3g2110 704 CDD PA_subtilisin_like 281 399 - -
Aed3g2110 704 Gene3D - 575 703 - -
Aed3g2110 704 Pfam Peptidase inhibitor I9 12 51 IPR010259 -
Aed3g2110 704 Gene3D Peptidase S8/S53 domain 76 571 IPR036852 GO:0004252|GO:0006508
Aed3g2110 704 ProSiteProfiles Serine proteases, subtilase domain profile. 56 558 - -
Aed3g2110 704 ProSitePatterns Serine proteases, subtilase family, histidine active site. 144 154 IPR022398 -
Aed3g2110 704 PANTHER PUTATIVE-RELATED 5 702 - -
Aed3g2110 704 Pfam Fibronectin type-III domain 606 702 IPR041469 -
Aed3g2110 704 CDD Peptidases_S8_3 51 533 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2110 Aed-Chr3 24971124 24974618 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2110 1 703 Subtilisin-like Serine Gene Family AT3G46850 46.143 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2110 - - gmx:100815516 1154.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2110 3 24971124 24974618 Aed3g2110 3 24971124 24974618 ECH