Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2104 ATGAGCACACAGGGACAAGTGATTGATGAGGCGGTTCTGGATGACATTATCCGCCGCTTAACGGAGGTCCGTTTGGCCCGACCCGGCAAGCAGGTTCAGCTCTCCGAGTCTGAGATCAAGCAACTCTGCGTCGCTTCCAGAGACATCTTCATTAACCAGCCCAATTTGCTTGAACTCGAAGCCCCCATCAAGATTTGTGGTGACATTCATGGGCAGTACAGTGATTTGTTAAGGCTATTTGAGTATGGGGGTTTGCCTCCTACTGCGAATTATCTCTTTTTGGGGGACTATGTGGACCGTGGGAAGCAGAGCTTAGAAACCATATGTCTTTTGCTTGCGTATAAAATCAAATATCCAGAAAACTTTTTCCTGTTGAGGGGCAATCATGAGTGTGCTTCCATTAATAGGATTTATGGGTTTTATGATGAATGTAAGCGGAGGTTTAATGTGAGGCTTTGGAAAGCCTTTACTGACAGTTTTAACTGCCTTCCTGTGGCAGCCCTTATAGATGATAAAATATTGTGCATGCATGGTGGTCTTTCCCCTGAACTCACAAACTTGGATGAAATCAGGAATCTACCTCGTCCTACTGCGATTCCCGACACTGGATTGCTTTGTGATTTGCTTTGGTCTGATCCTGGTAGGGATGTGAAGGGTTGGGGTATGAATGACAGAGGAGTGTCCTACACCTTTGGCCCTGATAAGGTCGCTGAATTTTTGACAAAGCATGACTTGGACCTCATTTGTCGTGCTCATCAGGTTGTAGAGGATGGGTATGAATTCTTTGCCGATAGGCAACTTGTTACGATATTTTCAGCTCCAAATTATTGTGGTGAATTTGACAATGCTGGTGCGATGATGAGTGTGGATGAAAACTTGATGTGCTCGTTTCAGATTCTTAAGCCTGCAGAGAAAAAAAAGTTTGCAATGCCAAACAAGATGTGA 945 0.4466 MSTQGQVIDEAVLDDIIRRLTEVRLARPGKQVQLSESEIKQLCVASRDIFINQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGLPPTANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDSFNCLPVAALIDDKILCMHGGLSPELTNLDEIRNLPRPTAIPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVAEFLTKHDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPAEKKKFAMPNKM 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2104 314 Pfam Serine-threonine protein phosphatase N-terminal domain 13 60 IPR031675 -
Aed3g2104 314 Pfam Calcineurin-like phosphoesterase 62 254 IPR004843 GO:0016787
Aed3g2104 314 SMART pp2a_7 34 304 IPR006186 GO:0016787
Aed3g2104 314 ProSitePatterns Serine/threonine specific protein phosphatases signature. 125 130 IPR006186 GO:0016787
Aed3g2104 314 PRINTS Serine/threonine phosphatase family signature 91 118 IPR006186 GO:0016787
Aed3g2104 314 PRINTS Serine/threonine phosphatase family signature 187 214 IPR006186 GO:0016787
Aed3g2104 314 PRINTS Serine/threonine phosphatase family signature 62 89 IPR006186 GO:0016787
Aed3g2104 314 PRINTS Serine/threonine phosphatase family signature 244 264 IPR006186 GO:0016787
Aed3g2104 314 PRINTS Serine/threonine phosphatase family signature 124 148 IPR006186 GO:0016787
Aed3g2104 314 PRINTS Serine/threonine phosphatase family signature 158 184 IPR006186 GO:0016787
Aed3g2104 314 PRINTS Serine/threonine phosphatase family signature 266 282 IPR006186 GO:0016787
Aed3g2104 314 CDD MPP_PP1_PPKL 12 302 - -
Aed3g2104 314 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 307 - -
Aed3g2104 314 Gene3D - 5 311 IPR029052 -
Aed3g2104 314 SUPERFAMILY Metallo-dependent phosphatases 22 306 IPR029052 -
Aed3g2104 314 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 7 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2104 Aed-Chr3 24932442 24936206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2104 63 247 Calmodulin-binding Proteins AT5G63870 31.818 4.58e-26 103
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g2104 3 24932442 24936206 Aed3g2104 3 24932442 24936206 ECH