Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2099 ATGGGGCAGAAGCAGCGATCGAGTTCCGATGCCGACAACGAAGTCAAGAAACGACGCCGTGTCGGTTTCTCAGGCGTAGATGCTGGAGTTGAGGCCAAAGACTGCATCACAATCTATTTAGTTTCAAGCAAGGAAGAATTTGATGCTCCAGAGAGTTTGGTCATTCATCCTGTGGATTTGAATAGCTTTTTTGATGATGATGGGAAAATTTATGGCTATGAAGGTTTGAAGATTACCATCTGGGTTAGTAGCATATCGTTTTATGCATATGCTGATATTACATTCCAGAGTTCTTCTGATCGAGGCAAAGGGGTCACAGATCTGAAATCTGCTCTTCAGACAATTTTTGCTCTGACTCTTGTTGATAGCAAGGATGAATTCCTTCAGAAATATTTGGGAGATAATGACTTTGTTAGAACAAACATCTCACATGGAGAAGCTTTAAAGCACAAAGCTTTCAAGGGGGACATTTGTGATTCTAATCAGCATACAGATTCATCTACTTCTACTGTTGAGGTTGTTGTCCGTTTGGTGGCAGGCAACATGGCTACTGGACAACTTTACAGTCATCTAATACCCCTCACACTACTTCTTGTTGATGGTAGCAGTCCTATTGATGTTACTGATTCACAGTGGGAGCTGTATGTTGTGTGTCAGAAGAAAACTGATCAGCAGGGAGAGATCCAATGTAGGTTGATTGGTTTTACTGCTATTTATCGATTTTATCACTATCCAGATGATTCCCGGCTGCGACTAAGCCAGATTCTTGTATTACCTCCTTACCAGCACAAGGGTTATGGTCGATTCCTTTTAGAGGTGCTATATGAGGTTGCTATATCTGAAAATGTTTTTGACTTCACAGTAGAAGAGCCATTAGATCACTTCCAACGTGTCCGCACTTGTGTGGACACACTTAGGCTGCTTCATTTTGACCCAATTCAGAATATAGTTACTAAAGCTGTTTCACTTCTGAAGCAAGGTAAGTTATCTAAGAAAGCGCATTGTCCTCGACTTTTGCCACCTCCCAGCGCTATTGAGGATGTAAGGAAAAGTCTGAAAATTAACAAGCAGCAGTTTCTCCAGTGTTGGGAGGTTTTGATCTACATTGGCCTTAATCCTGTTGACAAGAACACGGAGAACTTTGTTAGTATTATTTCAAACCGTGTTAAGTATGATATCTTAGGAAAAGATCCTGGGACATCCGGGAAGCAACTTATTGAAGTACCAAGTGAGGTTGATCAGGAGATGTCGTTTGTCATGTTCAGATCAGAAGCCAACGAAGCTAGTAGTGTGCAAATGGATGACAATCAGGCTAATCAAGAAGAGCAACTCCAGAAGTTAGTTCAGGAAAGGGTGAAAGAAATTCAGTTGATTGTGGAAAAGGTAACCCTGCATCATGGGAGCTCAGGGGTGGTGGTTAATTAA 1425 0.4161 MGQKQRSSSDADNEVKKRRRVGFSGVDAGVEAKDCITIYLVSSKEEFDAPESLVIHPVDLNSFFDDDGKIYGYEGLKITIWVSSISFYAYADITFQSSSDRGKGVTDLKSALQTIFALTLVDSKDEFLQKYLGDNDFVRTNISHGEALKHKAFKGDICDSNQHTDSSTSTVEVVVRLVAGNMATGQLYSHLIPLTLLLVDGSSPIDVTDSQWELYVVCQKKTDQQGEIQCRLIGFTAIYRFYHYPDDSRLRLSQILVLPPYQHKGYGRFLLEVLYEVAISENVFDFTVEEPLDHFQRVRTCVDTLRLLHFDPIQNIVTKAVSLLKQGKLSKKAHCPRLLPPPSAIEDVRKSLKINKQQFLQCWEVLIYIGLNPVDKNTENFVSIISNRVKYDILGKDPGTSGKQLIEVPSEVDQEMSFVMFRSEANEASSVQMDDNQANQEEQLQKLVQERVKEIQLIVEKVTLHHGSSGVVVN 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2099 474 Pfam Histone acetyl transferase HAT1 N-terminus 30 154 IPR019467 GO:0006325
Aed3g2099 474 Coils Coil 430 450 - -
Aed3g2099 474 PANTHER HISTONE ACETYLTRANSFERASE TYPE B CATALYTIC SUBUNIT 1 463 - -
Aed3g2099 474 CDD NAT_SF 227 283 - -
Aed3g2099 474 PANTHER HISTONE ACETYLTRANSFERASE TYPE B CATALYTIC SUBUNIT 1 463 IPR017380 GO:0004402|GO:0005634|GO:0016573|GO:0031509
Aed3g2099 474 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 26 369 IPR016181 -
Aed3g2099 474 Gene3D - 33 200 IPR037113 GO:0006325
Aed3g2099 474 Gene3D - 142 299 - -
Aed3g2099 474 Pfam MOZ/SAS family 210 297 IPR002717 GO:0004402|GO:0006355|GO:0016573
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2099 214 292 C2H2 Transcription Factor Family AT5G64610 34.177 6.64e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2099 K11303 - gmx:100820418 869.766