Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2090 ATGATGGAGGAATCATCTGATGAGTCTCAGCAGCAGCAGTGGATGCATGTGATGAACAGAGAACAAATCCTGAATAAGTCACAGTCACAGTCATGGGAAGAAAAGGCTTTTGCTGAAGACGCAGCTAGGATAATTGGTGGGAGCATGTGGCCTCAAAGATCTTACTCTTGCACCTTTTGCAGAAGAGACTTCAAATCTGCTCAAGCTCTTGGGGGTCACATGAATATCCACAGAAGGGACAGGGCTAGGCTCAAACAACACAATCATCATCATCATGCAACAACAATTACAACAACAACCAGACTCTCATGTCTATCATCCACAACACAAGATAATTTTTCACCTTCTTTTTCAACTATCTTGGGACATATGGGGTCTCCTAATTCAGAACAAGAAGGGGTAGTCAAAGCAAGGGAGGAGTACAAATTTAATGGCTTGGGATGTAGGAATTATGTTGAAACAAGTTTTTCTGTGGGACGCACTTCAATGTTTGGTAAAAAAACATCACCTTGTGGGGACATACCCAACAACAACAACATCAGTTGCAACAAGAGATCAGCACTGAAGAGTAGAATTTCTTCTTCTTTGCAACCTCTCTTCCTGAAGCCATGTTCAAATGATAGAAGCTTATTTTTTCAACCTGTGGATCTTGATCATGGAATGGAAGACTTGGATCTTGAACTCAGGCTAGGGAAACAACAGAAAGTTAAGTAG 714 0.4146 MMEESSDESQQQQWMHVMNREQILNKSQSQSWEEKAFAEDAARIIGGSMWPQRSYSCTFCRRDFKSAQALGGHMNIHRRDRARLKQHNHHHHATTITTTTRLSCLSSTTQDNFSPSFSTILGHMGSPNSEQEGVVKAREEYKFNGLGCRNYVETSFSVGRTSMFGKKTSPCGDIPNNNNISCNKRSALKSRISSSLQPLFLKPCSNDRSLFFQPVDLDHGMEDLDLELRLGKQQKVK 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2090 237 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 13 236 - -
Aed3g2090 237 SUPERFAMILY beta-beta-alpha zinc fingers 52 82 IPR036236 -
Aed3g2090 237 Gene3D Classic Zinc Finger 47 112 - -
Aed3g2090 237 ProSiteProfiles Zinc finger C2H2 type domain profile. 55 82 IPR013087 -
Aed3g2090 237 ProSitePatterns Zinc finger C2H2 type domain signature. 57 77 IPR013087 -
Aed3g2090 237 PANTHER OS07G0101800 PROTEIN 13 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2090 Aed-Chr3 24818517 24819230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2090 31 91 C2H2 Transcription Factor Family AT2G37740 72.131 9.36e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2090 - - gmx:102660217 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed9g1887 9 22377448 22378284 Aed3g2090 3 24818517 24819230 ECH
Aed3g2090 3 24818517 24819230 Aed3g2090 3 24818517 24819230 ECH
Aed7g2135 7 23904507 23905424 Aed3g2090 3 24818517 24819230 PCT