Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2084 ATGGCTTCATCAAACTCCCACAACAATCTTATTAATAACAAGGAAAATTCTTCTTGTTCTTGGACACGCATGCAGAACAAGCAATTCGAAAGAGCACTTGCCTTGTACGATAAAGACACACCAGATCGATGGGAAAACATTGCAAAAGTGGTCGGTGGTGATAAATCGGCTGAGGAAGTGAAGAGACACTATGAAATCCTTTTGGAGGACCTTAGGCATATAGAGTCTGGACATGTTCCAATTCCCACCTATAAGGTAATTAATGGATCATTTCATTCCTCTTCACAATTTCATACCCCCTCATACTCATGCTCATGCACATGCACTGCTGTTTAA 336 0.4077 MASSNSHNNLINNKENSSCSWTRMQNKQFERALALYDKDTPDRWENIAKVVGGDKSAEEVKRHYEILLEDLRHIESGHVPIPTYKVINGSFHSSSQFHTPSYSCSCTCTAV 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2084 111 SMART sant 17 70 IPR001005 -
Aed3g2084 111 SUPERFAMILY Homeodomain-like 20 76 IPR009057 -
Aed3g2084 111 ProSiteProfiles Myb-like domain profile. 13 68 IPR001005 -
Aed3g2084 111 Gene3D - 12 81 - -
Aed3g2084 111 PANTHER PROTEIN RADIALIS-LIKE 3 12 86 - -
Aed3g2084 111 CDD SANT 20 68 IPR001005 -
Aed3g2084 111 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 12 86 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2084 Aed-Chr3 24782449 24782784 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed3g2084 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2084 - - gmx:100788168 137.117