Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed3g2065 | ATGACATTTGGGTTAATGGAGGTTCAGCTGGTGAAAGCAAAGGGTCTTCAAGAAACTGATATCTTTGCTCATATGGATCCGTATGTCCTGTTACAATACAAAGGTCAAGAGCGCAAGAGCAGTGTAATTCATGAGGGGGGCAGAAATCCTGTATGGAATGAGAAATTTGTATTCAGAGTGGAATACCCTGGATCAGGTGATCAATACAAGCTCAACCTTAGAATCATGGACAAGGACGTATTTTCTGCAGATGATTTTGTTGGCCAGGCTACAGTCTATGTAAAGGATTTGTTGGCAGACGGAGCAGAGAAGGGATCAGCTGAGCTTCGTCCTCACAAGTATAGTGTTGTTCGAGCTGATCAATCTTATTGTGGTGAGATTGAAGTTGGTATAACTTTCACCCGAAAGGAAGAGGAATATACTGACAATGATGTTGGAGGATGGAAGGAAAGTTGCTTCTAG | 462 | 0.4242 | MTFGLMEVQLVKAKGLQETDIFAHMDPYVLLQYKGQERKSSVIHEGGRNPVWNEKFVFRVEYPGSGDQYKLNLRIMDKDVFSADDFVGQATVYVKDLLADGAEKGSAELRPHKYSVVRADQSYCGEIEVGITFTRKEEEYTDNDVGGWKESCF | 153 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed3g2065 | 153 | ProSiteProfiles | C2 domain profile. | 1 | 109 | IPR000008 | - | |
Aed3g2065 | 153 | Gene3D | C2 domain | 3 | 135 | IPR035892 | - | |
Aed3g2065 | 153 | CDD | C2_putative_Elicitor-responsive_gene | 4 | 127 | - | - | |
Aed3g2065 | 153 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 3 | 138 | IPR035892 | - | |
Aed3g2065 | 153 | SMART | C2_3c | 5 | 106 | IPR000008 | - | |
Aed3g2065 | 153 | Pfam | C2 domain | 5 | 105 | IPR000008 | - | |
Aed3g2065 | 153 | PANTHER | INGRESSION PROTEIN FIC1 | 1 | 153 | - | - | |
Aed3g2065 | 153 | PANTHER | 16 KDA PHLOEM PROTEIN 1 | 1 | 153 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed3g2065 | Aed-Chr3 | 24621433 | 24624438 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed3g2065 | 3 | 109 | C2H2 Transcription Factor Family | AT4G21160 | 30.841 | 1.12e-12 | 62.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed3g2065 | - | - | gmx:100500493 | 300.827 |