Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2065 ATGACATTTGGGTTAATGGAGGTTCAGCTGGTGAAAGCAAAGGGTCTTCAAGAAACTGATATCTTTGCTCATATGGATCCGTATGTCCTGTTACAATACAAAGGTCAAGAGCGCAAGAGCAGTGTAATTCATGAGGGGGGCAGAAATCCTGTATGGAATGAGAAATTTGTATTCAGAGTGGAATACCCTGGATCAGGTGATCAATACAAGCTCAACCTTAGAATCATGGACAAGGACGTATTTTCTGCAGATGATTTTGTTGGCCAGGCTACAGTCTATGTAAAGGATTTGTTGGCAGACGGAGCAGAGAAGGGATCAGCTGAGCTTCGTCCTCACAAGTATAGTGTTGTTCGAGCTGATCAATCTTATTGTGGTGAGATTGAAGTTGGTATAACTTTCACCCGAAAGGAAGAGGAATATACTGACAATGATGTTGGAGGATGGAAGGAAAGTTGCTTCTAG 462 0.4242 MTFGLMEVQLVKAKGLQETDIFAHMDPYVLLQYKGQERKSSVIHEGGRNPVWNEKFVFRVEYPGSGDQYKLNLRIMDKDVFSADDFVGQATVYVKDLLADGAEKGSAELRPHKYSVVRADQSYCGEIEVGITFTRKEEEYTDNDVGGWKESCF 153
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2065 153 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
Aed3g2065 153 Gene3D C2 domain 3 135 IPR035892 -
Aed3g2065 153 CDD C2_putative_Elicitor-responsive_gene 4 127 - -
Aed3g2065 153 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 138 IPR035892 -
Aed3g2065 153 SMART C2_3c 5 106 IPR000008 -
Aed3g2065 153 Pfam C2 domain 5 105 IPR000008 -
Aed3g2065 153 PANTHER INGRESSION PROTEIN FIC1 1 153 - -
Aed3g2065 153 PANTHER 16 KDA PHLOEM PROTEIN 1 1 153 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aed3g2065 Aed-Chr3 24621433 24624438 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2065 3 109 C2H2 Transcription Factor Family AT4G21160 30.841 1.12e-12 62.4
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2065 - - gmx:100500493 300.827