Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2049 ATGATGAGTTTGTGTTCTGGTGACACCAACGGTGTAACTGTTTCCAATGCACACGTTTCCTCTTCTGACCACAAAAGGCACGACAACAAACTCATGACCCTTTTGAAAAAAACCATGCGGGAGTTTGCCTTGGCATGTGTTGGTGTTGTTCCTTGTGGTGGCTATAACGACCTTACCGGTCGAAAGAAGACAACTTTGGAGCATAATAACAAGGCGTGGCTACTGGCAGAGTCAGGAGCAGAATTGGCAAGTGCTGATCCTCAATCGGTTCACTCATCTTTCAGGTTCAGCTTCTGCTCTCAGGTTGAGGTTGAGTCCTTCAGCGTGACCTCTTCTGCTTCTGCTGCTGCTGCTGCAACCTTCTTGATGGTGAATTTGGACTATGAATCTCAAGTGAAGGAGCTGAAATGGATGAGAATACATTCACTGGAGAAAAGCCTGTCTCCGGTTGCCAACAACACTTTGATCAGGTTCAGCTATGATGAAATAATGTCTGCTACTCGCAATTTCTCCAAAGAGAGAGTGTTGGGGAGAGGTGCCTTGAGCTGTGTTTTTAGAGGGAGAGTTGGGCTTTGGAGGACTTCTGTTGCTATTAAAAGGTTGGATAAGGAAGACAAGGAGTGTGCCAAGGCGTTTTGCAGAGAATTGATGATTGCTAGTTCTCTTCATAACACAAATGTTGTTCCTCTTTTGGGGTTTTGTATTGACTCAGAGGAGGGTTTGTTTTTGGTGTACAAGTATGTGTCAGGAGGAAGCTTAGAGCATCACTTACATGGGAGGAAGAAGAGTGTGAAGGGTGGTAGTTCACCACTTCCATGGTGTGTGAGGTATAAAGTTGCAATTGGGATTGCAGAAGCTGTGGCTTATCTGCATAATGGAACAGAAAGATGTGTTGTTCATAGAGATATTAAGCCTTCAAACATTCTGCTTTCCTCTAAGAAGATTCCAAAGTTATGTGATTTTGGGCTAGCTTCATGGACCTCTGCACCTTCAGTTCCTTTCCTTTGCAAAACTGTGAAAGGAACATTTGGTTATTTGGCTCCTGAGTATTTTCAACATGGGAAAGTGTCAGATAAGACTGATGTTTATGCTTTGGGAGTTGTTCTACTGGAACTCTTAACTGGCCGCAAGCCAATTGAAGCAAAAAGACCCCCTGGAGAGGAAAACTTGGTACTATGGGCTAAACCATTGCTGAGAAAAGGGAAAGGAGCCATTGAAGAGTTGCTTGATCCTCAAGTCAAGTACAATTCGAGTTACACGGATCAAATGGTTCGGATGATTGATGCAGCTGCTGCATGTGTTACAAGTGAAGAATCAAGGAGGCCTAGCATAGGTGAGATTGTTGCAATACTGAAAGGTGAAGTAGAGCCTGTTTTCTCTAGAAGAAGGAAATCTGGTTATTTTAATGGATATTTAATCGATTATTACCCTCAGTTACAACAAGCACATAATGAGATGAAAAGCCACTTGGCTTTGGCTATGCTAGGAGTTCCAGAGTGTGAGGATGATGATCTTCTCTATGGCCGTTGA 1530 0.4346 MMSLCSGDTNGVTVSNAHVSSSDHKRHDNKLMTLLKKTMREFALACVGVVPCGGYNDLTGRKKTTLEHNNKAWLLAESGAELASADPQSVHSSFRFSFCSQVEVESFSVTSSASAAAAATFLMVNLDYESQVKELKWMRIHSLEKSLSPVANNTLIRFSYDEIMSATRNFSKERVLGRGALSCVFRGRVGLWRTSVAIKRLDKEDKECAKAFCRELMIASSLHNTNVVPLLGFCIDSEEGLFLVYKYVSGGSLEHHLHGRKKSVKGGSSPLPWCVRYKVAIGIAEAVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLASWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYALGVVLLELLTGRKPIEAKRPPGEENLVLWAKPLLRKGKGAIEELLDPQVKYNSSYTDQMVRMIDAAAACVTSEESRRPSIGEIVAILKGEVEPVFSRRRKSGYFNGYLIDYYPQLQQAHNEMKSHLALAMLGVPECEDDDLLYGR 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2049 509 SUPERFAMILY Protein kinase-like (PK-like) 148 452 IPR011009 -
Aed3g2049 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 298 310 IPR008271 GO:0004672|GO:0006468
Aed3g2049 509 ProSiteProfiles Protein kinase domain profile. 170 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2049 509 Gene3D Phosphorylase Kinase; domain 1 155 247 - -
Aed3g2049 509 Pfam Protein kinase domain 170 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2049 509 PANTHER OS01G0750732 PROTEIN 19 507 - -
Aed3g2049 509 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1 19 507 - -
Aed3g2049 509 Gene3D Transferase(Phosphotransferase) domain 1 248 463 - -
Aed3g2049 509 SMART serkin_6 170 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2049 Aed-Chr3 24526332 24530732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2049 148 454 Trihelix Transcription Factor Family AT1G70460 40.777 9.65e-70 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Aed3g2049 Pkinase 2.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2049 - - gmx:100802176 860.136