Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2026 ATGAAATCTTTAGTCTTTGCCATTATTATCTTCACCCTCTTGTCAAGCTCCCAACAGCAGCAACAAGATGATGATGATGCTTCTGTAATGCTGGCACTCAAGAACAGCCTCAACCCGCCGGGGTGGTCCGACCCGGAGCCATGCAAGTGGACCCGCGTTAGATGCTCCGACGACAAACGGGTCACCCGGATCCAAATCGGCCGGCTCAACCTCCAAGGGACCCTCCCCACAACTCTTCAGAAACTCACCCACTTAGAACACCTGGAGCTTCAATACAACAACATCTCCGGTCCCTTACCTTCCCTCAACGCCTTAACCAGCCTCCGTGTCTTCGTCGCCAGCAACAACCGCTTCTCCGCCGTCCCCGCCGACTTCTTCGCCGCCATGTCGCAGCTCCAGGCTGTGGACATAGACAACAACCCCTTCGAGCCGTGGGAGATTCCTCAGAGTCTCCGAAATGCTTCTGGCCTTCAGAACTTCTCTGCTAACTCTGCCAACATCAGAGGCACCATCCCTGATTTCTTCAGCTCCGATGTTTTCCCTGGCTTGACCCTTTTGCACTTGGCTATTAACAACCTTGAAGGTACTTTGCCTTTGAGCTTTTCAGGGTCGCAGATTCAGTCTCTGTGGTTGAATGGACAGAAGAGTGTTAATAAGCTCGGTGGCAGTGTTGCGGTTTTGCAGAACATGACTTTCCTCACCGAAGTTTGGCTGCAGTCTAATGCTTTCACTGGCCCCTTGCCTGATTTGTCCGGGTTGAAGAGTTTGCGGGATTTCAGTTTGAGGGACAACAGGTTCACTGGTCCTGTTCCACCTTCATTGGTTGGTCTCAAGACGCTTAAAGTTTTGAACTTGACTAATAATTTGTTTCAGGGTCCAATGCCGGTGTTTGGTGATGGGGTTCAGGTGGATAATATTAAGGATTCCAATAGATTTTGCTTGCCGAGTCCGGGTGATTGTGATCCTAGGGTGAATGTTCTTCTTTCTGTTATTGGGGCTATGGGGTATCCTCAAAGGCTTGCTGAGAGTTGGAAGGGGAATGATCCCTGTGGTGATTGGATTGGGATTACCTGTAGTAGTGGAAATATAACTGTTGTTAATTTTCAGAAGATGGGACTTAGTGGTGTGATATCCCCCGAGTTTGTTAAACTTAAATCCTTGCAAAGGATAGTGTTGGCTGATAACAATCTCACCGGTACGATTCCGGAGGAGCTTGCTACTTTGCCTGCGCTTACTCAATTGAATGTTGCCAATAATCATCTCTATGGGAAGGTGCCGAGTTTTAGGAAAAATGTAGCTGTGAGTACAAGTGGTAACATTGATATAGGGAAGGATAAGAGTAGTCAATCCCCTCAGGGTTCTTTGTCTCCAATGGCTCCAAATGCGAAAGGAGATAGTGGCGGGGGTTCTGGAAATGGTGGCAAAAATTCTTCTTCCCATGTGGGAATAATTGTGTTTTCGGTGATAGGGGCTTTGTTTGTGGCTTCGTTGATTGGTTTCTTGCTCTTCTGCTTGTTTAGGATGAAGCAAAAGAAGCTGAGCAGGGTCCAGAGCCCAAATGCACTGGTTGTTCATCCTAGGCATTCTGGATCGGATAATGAGAGTGTGAAGATAACGGTTGCCGGTTCAAGTGTCAGCGTTGGTGCTGCTAGCGAAACACGGACCATGCCTGGCAGTGAGGCAGGAGATATTCAAATGGTTGAAGCGGGAAACATGGTCATTTCCATACAAGTTCTGAAGAATGTCACTGACAATTTCAGTCAGAAGAACATTCTGGGACAAGGAGGTTTCGGAACGGTTTACAGAGGTGAACTCCATGATGGTACAAGAATTGCGGTGAAAAGAATGGAGTGTGGGGCTATAGCCGGGAAGGGTGCGGCAGAATTCAAGTCCGAAATTACTGTTTTGACAAAGGTTCGCCACCGGCATCTTGTTGCTCTTCTTGGTTACTGCTTGGATGGGAATGAGAAGCTTCTTGTGTACGAGTACATGCCTCAGGGAACGTTGAGTAGGCATCTCTTTAACTGGCCAGAGGAAGGACTGGAACCACTGGAGATCCACGATACTTCAATAGCAACTGGAGACAATCATTTCTTCGCCATTGACTCCACAATTGAGCTCAACGAGGAAACGCTTGCTAGTATTCACACGGTAGCGGAGTTAGCTGGCCACTGCTGTGCGAGGGAGCCATACCAAAGGCCTGACATGGGTCATGCTGTGAATGTGCTTTCTTCTCTTGTGGAACTCTGGAAACCATCTGATCAGAATTCGGAAGATATATATGGAATTGACCTTGACATGTCCCTACCACAAGCACTTAAGAAGTGGCAAGCTTATGAAGGTAGAAGTCAAATGGAGTCGTCTTCTTCGTCTTCGCTTCTTCCAAGCTTGGATAACACACAGACAAGTATACCTACTCGCCCTTATGGATTTGCTGATTCTTTCACATCAGCAGATGGACTTCTGCTGACAAATGGGAAGAGATTCTCAGCTGAGGATGGAGATTTCAAAATTTGTGAGAGAATACAACTTTATGGCTACATGCCACAAGGTTGGTGTCATATGGATGTTGCAGGGAATCTGGCGTTTATGAAAGTAGTTTTGGATGAGTATGAATTTTTGTGA 2625 0.4724 MKSLVFAIIIFTLLSSSQQQQQDDDDASVMLALKNSLNPPGWSDPEPCKWTRVRCSDDKRVTRIQIGRLNLQGTLPTTLQKLTHLEHLELQYNNISGPLPSLNALTSLRVFVASNNRFSAVPADFFAAMSQLQAVDIDNNPFEPWEIPQSLRNASGLQNFSANSANIRGTIPDFFSSDVFPGLTLLHLAINNLEGTLPLSFSGSQIQSLWLNGQKSVNKLGGSVAVLQNMTFLTEVWLQSNAFTGPLPDLSGLKSLRDFSLRDNRFTGPVPPSLVGLKTLKVLNLTNNLFQGPMPVFGDGVQVDNIKDSNRFCLPSPGDCDPRVNVLLSVIGAMGYPQRLAESWKGNDPCGDWIGITCSSGNITVVNFQKMGLSGVISPEFVKLKSLQRIVLADNNLTGTIPEELATLPALTQLNVANNHLYGKVPSFRKNVAVSTSGNIDIGKDKSSQSPQGSLSPMAPNAKGDSGGGSGNGGKNSSSHVGIIVFSVIGALFVASLIGFLLFCLFRMKQKKLSRVQSPNALVVHPRHSGSDNESVKITVAGSSVSVGAASETRTMPGSEAGDIQMVEAGNMVISIQVLKNVTDNFSQKNILGQGGFGTVYRGELHDGTRIAVKRMECGAIAGKGAAEFKSEITVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSRHLFNWPEEGLEPLEIHDTSIATGDNHFFAIDSTIELNEETLASIHTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPSDQNSEDIYGIDLDMSLPQALKKWQAYEGRSQMESSSSSSLLPSLDNTQTSIPTRPYGFADSFTSADGLLLTNGKRFSAEDGDFKICERIQLYGYMPQGWCHMDVAGNLAFMKVVLDEYEFL 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2026 874 ProSitePatterns Protein kinases ATP-binding region signature. 592 624 IPR017441 GO:0005524
Aed3g2026 874 Gene3D Ribonuclease Inhibitor 322 446 IPR032675 -
Aed3g2026 874 Pfam Leucine rich repeat 381 421 IPR001611 GO:0005515
Aed3g2026 874 MobiDBLite consensus disorder prediction 439 459 - -
Aed3g2026 874 ProSiteProfiles Protein kinase domain profile. 586 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2026 874 Pfam Protein tyrosine and serine/threonine kinase 588 676 IPR001245 GO:0004672|GO:0006468
Aed3g2026 874 MobiDBLite consensus disorder prediction 439 474 - -
Aed3g2026 874 PANTHER OSJNBA0070M12.3 PROTEIN 699 820 - -
Aed3g2026 874 Gene3D Ribonuclease Inhibitor 22 320 IPR032675 -
Aed3g2026 874 SUPERFAMILY Protein kinase-like (PK-like) 564 678 IPR011009 -
Aed3g2026 874 Gene3D Phosphorylase Kinase; domain 1 546 663 - -
Aed3g2026 874 PANTHER OSJNBA0070M12.3 PROTEIN 5 686 - -
Aed3g2026 874 ProSiteProfiles Leucine-rich repeat profile. 84 106 IPR001611 GO:0005515
Aed3g2026 874 PANTHER RECEPTOR PROTEIN KINASE TMK1 699 820 - -
Aed3g2026 874 Pfam Leucine rich repeat N-terminal domain 24 56 IPR013210 -
Aed3g2026 874 Pfam Leucine rich repeat N-terminal domain 325 359 IPR013210 -
Aed3g2026 874 PANTHER RECEPTOR PROTEIN KINASE TMK1 5 686 - -
Aed3g2026 874 SUPERFAMILY L domain-like 55 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2026 Aed-Chr3 24283714 24287854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2026 75 669 Receptor kinase-like Gene Family AT1G55610 26.739 7.20e-43 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Aed3g2026 PK_Tyr_Ser-Thr 3.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2026 - K00924 gmx:100789646 1191.41