Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed3g2024 | ATGACGATTGCTTCTTCCTCCAGAAAAGTAAACAAGGATGAACAGGTGGCACAACGTAAAATCCAGAAGCCAAGATGGCTTGAGGCTTTTCTGAGGAAAACGTTCTTTGACTCATGTCCATCTCATCCATTTCGTAGGAATGAGTTAAATAAGTATTGTATAAACTGCAATTTATCAGCTTGCCAATATTGTGTAACAATAGGTCCTCATCGCCATCACAAGATACTTAAAATCTATAGACATGTTTACAAGGATGTTGTCTCCCTTGCAACTATGGAAAAATTTATTGACAGTTCACAAATTCAGCCTTACAAATGCAACAAGCGATTAGTTATTTCTCTGAATCCTCTCCCACATTCTGGTTCAACAACAAATAATGAGGCATCATGCAATACTTGCAATAGAAAATTGACTGAACCCGATTTATATCGCTATTGCTCCATTTCTTGCAAGGTCAAAGCTGTTTTAAGTAAGAATGATGATTCAATTCCTCCTTTCATTTCCATCAAGACTCCTCATCCTCTTCCGGAAAAGCAGGAGGAAACTTCTGAACCCCAAAACCTAAGAAAGAGGAAAAGAAAGGGAATACCTCACAGAGCTCCCTTTTTCTAA | 612 | 0.3807 | MTIASSSRKVNKDEQVAQRKIQKPRWLEAFLRKTFFDSCPSHPFRRNELNKYCINCNLSACQYCVTIGPHRHHKILKIYRHVYKDVVSLATMEKFIDSSQIQPYKCNKRLVISLNPLPHSGSTTNNEASCNTCNRKLTEPDLYRYCSISCKVKAVLSKNDDSIPPFISIKTPHPLPEKQEETSEPQNLRKRKRKGIPHRAPFF | 203 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed3g2024 | 203 | ProSiteProfiles | Zinc finger B-box type profile. | 39 | 78 | IPR000315 | GO:0008270 | |
Aed3g2024 | 203 | MobiDBLite | consensus disorder prediction | 174 | 190 | - | - | |
Aed3g2024 | 203 | CDD | Bbox2 | 39 | 78 | - | - | |
Aed3g2024 | 203 | MobiDBLite | consensus disorder prediction | 166 | 203 | - | - | |
Aed3g2024 | 203 | Gene3D | Classic Zinc Finger | 32 | 102 | - | - | |
Aed3g2024 | 203 | PANTHER | TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED | 5 | 203 | - | - | |
Aed3g2024 | 203 | SUPERFAMILY | B-box zinc-binding domain | 38 | 80 | - | - | |
Aed3g2024 | 203 | Pfam | PLATZ transcription factor | 80 | 152 | IPR006734 | - | |
Aed3g2024 | 203 | PANTHER | PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN | 5 | 203 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed3g2024 | Aed-Chr3 | 24272808 | 24275734 | Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | PLATZ | Aed3g2024 | PLATZ | 1.3e-19 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed3g2024 | - | - | tcc:18601328 | 282.337 |