Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2017 ATGGATGCTCCGGTTAAGAAAAAGGCATTTTCACGTGCTGGCTTGAGTCCTCAGAGGAAAGACAAGTGCATAGTTTTCCCCCTTGTGAGGTACAATGAATTCCGGCAGCCTGTTTGCCAGGCTTGTAATGTGGTTATGTTGGAGTCTATTCGTGCACACCTAGCTTCTCCTGAGCATAACGAGGTAATGGAAAAACTGAAAGCTAATGCTGCTGCTGCTGCTGGATCAACTGGAGATAAGAATGCAAAGCCAGTTACTGGTACCAACTCTCCCAAGGCTAATCCAGAACAACCTCGAGACACAGAAGGCCAACTTCCTGAAGTTTCACAAGATGTGCCTAAACAACAGTCTCCATCTGCACTTCCACGTGATTTTTGTGATGACAGTGGTAAAGTAAGGACAAGATCCGTTTCAAAAGTAACCGAAACGATGGATCCTCCTAAAGAACAAGAAAACGGGGAATCCAACAACGACTCTGCAAGGATGAAATCCAAAGTTTCACCTTCCACAGATGAAGCTTTGGTATCTTCAAAACGTGGAAGACCACGAAAAACAAAGCCTACCAAGTTTGTAATCAACCAGACATCTAGTCCCCCATCAACACCCCGAAGATCTAAAAGAATAAAGCATGTGGCAGATAAAACTACCAACAATGTGACTGAAGTATCTTCATCCGAGGAATTAATGAAGGGACGTACTGCAGAAAATTCACAAGTAGATGGCAAAGAAGTCTCTTCAGATATAGATTCCTTAGTAATCTACAAAAGAAAAAGACTACCTCGAAGGAGGTCTTCTGGTCAAATAAGCAATTCCCCAAAGCAAACTGCTCTTACAGAGCCTCGAACTGCTGCAATTTCAAGTTCTACTACTGCATCACCCCCTCATCAAGATCCTCTTGCAGCTGCTCCAGCCAACGTTGATGCTCCTCATATTGAAAATACAAACACTGCTGAGTCCGTATTGAGTAAAGGCCTTGTTGAAGAGGTTGAGAAAGTGAACCCTGCTCCAGCCAATGCTCAAGAACAGGTTGCTTCCAGCAAGGGTCATGAATCTCCAGGTCAAGTTGACTCAAAGGCTGATGAAGTCTCTACTGGGAACACCCCACTTGATCTAGAAGCCATTAACAAAATGATCGAAGAGGACCCTTTGAGTGCTATTGAAAATATCCTGTCAGGGAAGGTTTCCATTTCTTCTAAGACTCCACAATATATCACTCAGTCAGAACCACCAAAAGTTGAAAGCTCCCCTGCAGATGTTCTGTCAAAAGAGCTAAAAGACTTAATGCAGACCTTTAGCTTAGGTGATTTTGTTACTGACTATGAACAAATGTCAAAGGTCCTACTTATTCTTGAAGAGTTGCAGAAGAATGAGAAGTTTCTTTCTCTTGAACAGCAAACATTCATGAAGGCCTTCAGACTCTTTTTCAACAATGCTGTTACTCACCGCAAAGAATGCGATATGGCCGGAAATAAGAAAGTCGAGTTGAACCGAGCTAAAGAAGATATCCTTCACAAACTGCAAGAAGTTAAACATACACAGGAGCAAATCACAACAGCCATTTCAAATGCCAATAACCGAGTCAATGAAATATCTTCTTGTATTGAACAACTTGAAGAACGGTTATCCAAACTGAAGGAAGATAAGAATACCTTTCAGTTGGATATTAAGGAAAACAAGAAACAAAGGGAGACATTAAAGAATGATAGTATCTTATGGGCTCATCAGGCTAAAGACCTGGTTTTTGATCTTGCTGAGATTGAGGCCAAAGAAAAAACCCTTGGACGGCAACTTGAAGCAGACAATGATGCATATGACCAATTTAAAGCATCCTTTCCTTTTTAA 1842 0.4175 MDAPVKKKAFSRAGLSPQRKDKCIVFPLVRYNEFRQPVCQACNVVMLESIRAHLASPEHNEVMEKLKANAAAAAGSTGDKNAKPVTGTNSPKANPEQPRDTEGQLPEVSQDVPKQQSPSALPRDFCDDSGKVRTRSVSKVTETMDPPKEQENGESNNDSARMKSKVSPSTDEALVSSKRGRPRKTKPTKFVINQTSSPPSTPRRSKRIKHVADKTTNNVTEVSSSEELMKGRTAENSQVDGKEVSSDIDSLVIYKRKRLPRRRSSGQISNSPKQTALTEPRTAAISSSTTASPPHQDPLAAAPANVDAPHIENTNTAESVLSKGLVEEVEKVNPAPANAQEQVASSKGHESPGQVDSKADEVSTGNTPLDLEAINKMIEEDPLSAIENILSGKVSISSKTPQYITQSEPPKVESSPADVLSKELKDLMQTFSLGDFVTDYEQMSKVLLILEELQKNEKFLSLEQQTFMKAFRLFFNNAVTHRKECDMAGNKKVELNRAKEDILHKLQEVKHTQEQITTAISNANNRVNEISSCIEQLEERLSKLKEDKNTFQLDIKENKKQRETLKNDSILWAHQAKDLVFDLAEIEAKEKTLGRQLEADNDAYDQFKASFPF 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2017 613 MobiDBLite consensus disorder prediction 336 366 - -
Aed3g2017 613 MobiDBLite consensus disorder prediction 188 202 - -
Aed3g2017 613 MobiDBLite consensus disorder prediction 142 158 - -
Aed3g2017 613 MobiDBLite consensus disorder prediction 70 311 - -
Aed3g2017 613 Coils Coil 520 561 - -
Aed3g2017 613 MobiDBLite consensus disorder prediction 81 97 - -
Aed3g2017 613 MobiDBLite consensus disorder prediction 338 366 - -
Aed3g2017 613 MobiDBLite consensus disorder prediction 264 295 - -
Aed3g2017 613 MobiDBLite consensus disorder prediction 215 244 - -
Aed3g2017 613 Coils Coil 495 515 - -
Aed3g2017 613 MobiDBLite consensus disorder prediction 159 174 - -
Aed3g2017 613 PANTHER UNCHARACTERIZED 1 612 IPR040050 GO:0003676|GO:0005681|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2017 Aed-Chr3 24221588 24226878 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2017 1 72 C2H2 Transcription Factor Family AT3G02860 52.703 3.58e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2017 - K13104 gmx:100527920 989.949