Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g2002 ATGTCGCTTCTCTGCTTCACCTCACTACTTTCTATTTTCTGTTTCTTCAATTTCGTAACCGCCGCCACCGAGTTCGACTTCGGAACGTTAACTTTGGGAAGCCTCAAGCTCCTCGGCGACGCCCACTTGAACAACGGCACCGTCAGTCTCACGCGCGACCTCGCCGTTCCCTTCTCCGGCGCCGGCAGAGCTCTTTATTCCCGTCCCGTCAGATTCCGCCAACCGGGATACCGTTTTCCGGCGAGCTTCACAACCTTCTTTTCCTTCTCCGTCAACAACCTCAACCCCTCCTCTATCGGCGGCGGCCTAGCCTTTGTCCTCTCGCCGGATGACGAGACCATCGGCGACGCCGGCGGGTTTCTCGGCCTTAGCGCCGCCCCTGCCGATGCCGCCGGAGGCTTCATCGCCGTGGAGTTTGACACACTCATGGACGTGGAGTTTAAGGACATTAATGGGAACCACGTAGGTGTGGACTTAAACAGCGTCGTTTCGAGCGAGGTTGGTGATTTGGGGAACTTTGATATTGATCTGAAGAGTGGTGACCTAATCAACGCGTGGATCGAGCTCGATGGATCGAGCAAAGGGTTAAGCGTCTGGGTTTCGTATTCCAACCTCAAACCGAAAGATCCCGTTTTGTCGATGAGTCTCGACGTGGATAAGTATTTGAATGATTTTATGTATGTGGGGTTCTCTGGTTCAACGCAGGGTAGCACGGAGATTCACAGAATAGAGTGGTGGAGTTTTAGTTCGTCTTTTGCGGCGGCGGCGGATACGGCGGCGGCGCCTCCTCCGCCGACAATGAGTTTGATGAACCCGACGGCAAATTCGGTGAAGTCCGCGCCTCCTTCTTTGGCTCCTTCACACAGTGAAGAGAAAGAGAGCAAAAGCAAATCGTCTTGCCATAATGGGTTGTGTAAGCAAAATTTGGGAGCGGTTGCTGGTGTTGTTACTGCTGGGGCATTTGTTTTGGCTCTTTTTGCTGGTGCGTTGATTTGGTTTTACTCTAAGAAGGTTAAGCCTGTTAGCAAGTTTGATACTCTTGGGTCGGAGATCATTAAAATGCCAAAGCAGTTTAGCTACAAGGAGCTGAGGTCTGCAACCAAGTGCTTCAATGCGAATAGGATCATTGGTCATGGCGCATTTGGGACAGTCTATAAGGGATTTTTGCCTGAGAATGGGGACATTGTTGCGGTGAAGAGGTGCAGCCATAGTAGCCAGGGGAAGAATGAGTTCTTGTCTGAGTTGTCTATCATTGGGAGCCTGAGGCATCGGAATCTTGTTCGGCTTCAAGGGTGGTGCCATGAGAAAGGAGAGATTTTGCTGGTGTATGACTTGATGCCTAATGGGAGTTTGGATAAGGCATTGTTTGAGGCTAGGACGCCGCTTCCCTGGGCTCATAGACGGAAGATTCTGTTAGGCGTGGCTTCGGCATTGGCCTACTTGCATCAAGAGTGTGAGAATCAAGTGATTCATAGGGACATTAAGACTAGTAACATAATGTTGGATGAAGGGTTCAATGCCAGGTTGGGAGACTTTGGTTTGGCAAGGCAAACCGAGCATGATAAGTCGCCAGATGCCACGGTGGCTGCGGGGACAATGGGGTACCTGGCACCAGAGTATCTCCTTACGGGGAAGGCTACGGAGAAAACTGATGTGTTTAGTTACGGTGCAGTGGTTCTTGAGGTGGCTAGTGGAAGAAGACCAATAGAGAAGGATGCCAATGGTAAAGGTGGGATTAGCTGCAATTTGGTAGAATGGGTTTGGAGTTTGCACAGGGAAGGTAGGTTGCTAATGGCGGCTGATCCTAGGCTTGAGGGTGAGTTTGATGATGGGGAGATGAGGAAGGTGCTCTTGGTTGGGCTAGCGTGCTCTCACCCTGATCCATTGGCTAGACCTACTATGAGGGGTGTGGTTCAGATGCTGGTGGGTGAGGCTGAAGTGCCTATTGTCCCCAGAACCAAGCCGTCCACAGGTTTTAGTACTTCTCACTCCCACTTATTACTGAGTTTGCAAGATAGTGTATCTGACTGTGATGGTATAATCACCATCTCTACCTCCACGTCAGAGAATAGCTTCAATCTTGGAGACATAGTCTGA 2097 0.5074 MSLLCFTSLLSIFCFFNFVTAATEFDFGTLTLGSLKLLGDAHLNNGTVSLTRDLAVPFSGAGRALYSRPVRFRQPGYRFPASFTTFFSFSVNNLNPSSIGGGLAFVLSPDDETIGDAGGFLGLSAAPADAAGGFIAVEFDTLMDVEFKDINGNHVGVDLNSVVSSEVGDLGNFDIDLKSGDLINAWIELDGSSKGLSVWVSYSNLKPKDPVLSMSLDVDKYLNDFMYVGFSGSTQGSTEIHRIEWWSFSSSFAAAADTAAAPPPPTMSLMNPTANSVKSAPPSLAPSHSEEKESKSKSSCHNGLCKQNLGAVAGVVTAGAFVLALFAGALIWFYSKKVKPVSKFDTLGSEIIKMPKQFSYKELRSATKCFNANRIIGHGAFGTVYKGFLPENGDIVAVKRCSHSSQGKNEFLSELSIIGSLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWAHRRKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGKATEKTDVFSYGAVVLEVASGRRPIEKDANGKGGISCNLVEWVWSLHREGRLLMAADPRLEGEFDDGEMRKVLLVGLACSHPDPLARPTMRGVVQMLVGEAEVPIVPRTKPSTGFSTSHSHLLLSLQDSVSDCDGIITISTSTSENSFNLGDIV 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g2002 698 CDD STKc_IRAK 376 641 - -
Aed3g2002 698 Gene3D Phosphorylase Kinase; domain 1 335 445 - -
Aed3g2002 698 MobiDBLite consensus disorder prediction 263 297 - -
Aed3g2002 698 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 260 IPR013320 -
Aed3g2002 698 Pfam Legume lectin domain 24 255 IPR001220 GO:0030246
Aed3g2002 698 ProSiteProfiles Protein kinase domain profile. 370 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2002 698 SMART serkin_6 370 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2002 698 Gene3D - 21 262 - -
Aed3g2002 698 Pfam Protein kinase domain 371 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g2002 698 Gene3D Transferase(Phosphotransferase) domain 1 446 647 - -
Aed3g2002 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Aed3g2002 698 CDD lectin_legume_LecRK_Arcelin_ConA 13 246 IPR001220 GO:0030246
Aed3g2002 698 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 21 691 - -
Aed3g2002 698 SUPERFAMILY Protein kinase-like (PK-like) 352 665 IPR011009 -
Aed3g2002 698 ProSitePatterns Protein kinases ATP-binding region signature. 376 399 IPR017441 GO:0005524
Aed3g2002 698 PANTHER - 21 691 - -
Aed3g2002 698 ProSitePatterns Legume lectins beta-chain signature. 135 141 IPR019825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g2002 Aed-Chr3 24100653 24102749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g2002 1 680 Receptor kinase-like Gene Family AT3G53380 69.798 0.0 943
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed3g2002 Pkinase 1.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g2002 - - gmx:100810624 1187.94