Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1994 ATGGCACCTGTTTTGCCTCCAGGTTTCAGGTTCCATCCTACTGACGAAGAACTTGTTGCTTATTACCTTAAAAGGAAGATCAATGGCCGAAAGATTGAGTTGGAGATCATACCTGAAGTTGATCTCTATAAGTGTGAACCGTGGGACTTGCCAGGGAAATCGTTGTTACCGGGAAAGGATTTGGAGTGGTATTTCTTTAGCCCTCGTGATAGGAAGTACCCAAATGGATCAAGAACAAACCGTGCAACAAAATCTGGATATTGGAAGGCCACAGGGAAGGATAGAAAAGTAAATTCACAGGCTCGTGCTGTGGGTATGAAGAAAACCCTAGTTTACTATCGAGGAAGAGCACCCCATGGCTCTCGTACAAATTGGGTCATGCATGAATATCGTCTTGATGAGAGAGAATGCGAAACCAATTCAGGCTTGCAGGATGCATATGCTCTTTGCCGTGTGGTAAAGAAGACAGCAGTGATTCCTCCAAAAGTTGTTGGGGGGCACTATGTTAATGTTCCCAATGGCAACCATATGACAAGTGATCAATCATCAAGCATTGAACTATACTATGAAGGAAGGGGCGAAGATTTAGATCATAGTTCAAATTATTTGATGCCGGTGGATCACAACATGGGAAATATTGATCAGACTTCTCTCACTATCAATGGAGGAATGATGACAAGGGATCATGAGACATGGTCCCACTTCTCATCACAGCAAGATCCATTATTTAGTACTCTTCCAACTTCTTCATCATTTCCCAATTTTGGAGCCATACCATACCCTCCATCCAAGGTGGATATAGCTCTAGAGTGTGCAAGGATGCAGCATAGGTTTACTATGCCTCCATTGGAGGTGGATGACTTTCCTCAAGTTGGAATCTCAGAGCTGAAAATGGCACAAGCAGCCTCCGGTTCCATGCAAGGAAGCAGAACTCAGGAAACGGATATCTTGCAGGAAATTCTTTCAGTTGCTCAAGTTTCACAGGAATTAATAAACCAATCTAGCTACTCGCATGAATGGGGTGGTGGCAATGATAATAATTATCGTGAAGATGATTTTACCTTCATGGTTGGCACTAATAATTACAATCATTCAAATGAAATGAGGTATGTTGACAAGACATCATGGGAAGATGCAAACACAAGGACAATAGAGATTGGAGATGTGGATCATGAAGAATATTTTAAGGCAGAGAGGATGGTAGAGAATTTAAGATGGGTTGGAATGTCAAGAGAAGATTTAGAAAAGATGGAAGATCAAAAGATTGTTCCAATAGAGGATATTTCAGGCTTCCAAACTAACAGGGAAGAAAATGAGGTGCAAGAATCTGAGCATCATAGCAACAAGGAGCACAATGTCGACACTGAAGTCAACAATTTGATCTCATTGTATCATGACCCTAACGAGAACTTCATAGAAGATGGTAATGATTATTCAAGTTCTCCTAGTTTTGAGGTCGTTGAGGAAACAAAGGTCAATCATGGAATGCTTGTTTCGACTCATCAAGTTGTCGACACATTCTTTCACCAAATAGTTCCTTCACAAACCGTTCAAGTTCACCTCATGGCACACAATCATTATGTGGAGAATGCAGAGGCAAAGCTAATGATAGTGGAGAACAAAGGGTCTTTATTAAGAAAGGTTAAGGCCTATTTGATGGGGAAGCTTATAAAGCCTTCAAAGACAATAGCAAGTGCAATTGTATTCGTCTTTGCACTTGTGTTGATGCATTGTGTTTATTTGAAGGAAGAAGTGGGAGTTTGGAATGAGTCAAATAATGAGGTTTGGTTTGTTGGTGTCAAAAGTACTCACGAGAAAGGATTAAGTGCTGTCTTGAAGAAAATAGGCATTTTTCTCACCATTTCTTTGGCTCTTTGTACCATGTGGGCTAATCAGAATGTGGTAGTTAACCCTTGA 1917 0.4085 MAPVLPPGFRFHPTDEELVAYYLKRKINGRKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQARAVGMKKTLVYYRGRAPHGSRTNWVMHEYRLDERECETNSGLQDAYALCRVVKKTAVIPPKVVGGHYVNVPNGNHMTSDQSSSIELYYEGRGEDLDHSSNYLMPVDHNMGNIDQTSLTINGGMMTRDHETWSHFSSQQDPLFSTLPTSSSFPNFGAIPYPPSKVDIALECARMQHRFTMPPLEVDDFPQVGISELKMAQAASGSMQGSRTQETDILQEILSVAQVSQELINQSSYSHEWGGGNDNNYREDDFTFMVGTNNYNHSNEMRYVDKTSWEDANTRTIEIGDVDHEEYFKAERMVENLRWVGMSREDLEKMEDQKIVPIEDISGFQTNREENEVQESEHHSNKEHNVDTEVNNLISLYHDPNENFIEDGNDYSSSPSFEVVEETKVNHGMLVSTHQVVDTFFHQIVPSQTVQVHLMAHNHYVENAEAKLMIVENKGSLLRKVKAYLMGKLIKPSKTIASAIVFVFALVLMHCVYLKEEVGVWNESNNEVWFVGVKSTHEKGLSAVLKKIGIFLTISLALCTMWANQNVVVNP 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1994 638 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 388 - -
Aed3g1994 638 MobiDBLite consensus disorder prediction 429 450 - -
Aed3g1994 638 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 388 - -
Aed3g1994 638 Pfam No apical meristem (NAM) protein 6 132 IPR003441 GO:0003677|GO:0006355
Aed3g1994 638 SUPERFAMILY NAC domain 3 155 IPR036093 GO:0003677|GO:0006355
Aed3g1994 638 Gene3D NAC domain 14 158 IPR036093 GO:0003677|GO:0006355
Aed3g1994 638 ProSiteProfiles NAC domain profile. 5 155 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1994 Aed-Chr3 24028619 24032651 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1994 1 580 NAC Transcription Factor Family AT1G65910 47.659 1.15e-156 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aed3g1994 NAM 4.8e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1994 - - gmx:100809019 1068.91