Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1992 ATGGAGCAGGAACGACAAAACCTTGAAAGCTTCTTATCATGGGCAGCACAGCTTGGAATATCAGACTCAACAACACGCACCAACCAATCTCAGCACTCTCTTTCCTCATGTTTGGGTTCTTCTCTATGCGTCTCTCATTTTCCTCACACTGGCGGGAGAGGTTTGGGTGCTGTGAGAGACCTTAGGAGGGGAGAGATTATTCTCAGGGTTCCAAAATCTGCTTTGATGACAACAGAGAGTGTTATGGAAGATAAAAAGCTCTGTGATGCTGTCAGTAGACACTCTTCTCTCTCCTCAGTTCAGATGTTGATTGTTTGCTTGTTGTATGAATTTGGCAAAGGAAAGGCTTCAAGGTGGCATCCTTACCTCATGCATTTGCCACACACTTATGACATACTAGCCATGTTTGGTGAATTTGAGAAGCGTGCTCTGCAAGTCGATGAGGCAATATGGGTCACAGAAAAAGCTACACTAAAAGCCAAATCAGAGTGGAAAGAAGCTCATGTTTTGATGGAAGATCTAATGTTTAAGCCCCAGTTTTTAACATTTAAAGCCTGGCTTTGGGCTGCTGCAACGATATCTTCCCGGACATTGCATATACCATGGGATGAAGCTGGGTGTTTATGCCCTGTGGGTGACTTGTTTAACTATGATGCACCTGGAGAGGAGCCATCTGACGTTGTGGATTTAGAGTGTTTGCTATCTAACACCTCCATCCGTGATACAATCCTATTGAATGGAGACAAGAATATTATGGTAGATGCAGAACAACTTGATTCTCATTCCCAGAGATTAACAGATGGTGGGTTTGATAAAGATGTTAATGCATATTGCTTTTATGCTAGGTCACATTACAACAAAGGAGACCAGGTTCTATTATGCTATGGAACTTACACAAATTTGGAGCTTCTTGAACACTATGGGTTTCTCCTACAAGAAAATCCAAATGACAAAGTTTATATCCCTTTGGAACCTGCTGTATATTCTTCCACTTCATGGTCTAAGGATTCACTCTATATCCATCACAACGGGAAGCCTTCCTTTGCACTACTTGCTGCATTGCGGCTGTGGGCAACCCCTCAAAACAAGAGGAGGTCTGTTGGACATCTTGTGTATTCTGGTTCTCAACTGTCTGCAGACAATGAAATTTTCATCATGAAATGGCTGTTAAAAACTTGTGATGCCATGTTAAAGAATCTGCCAACATCTCTTGAGGAAGACACCTTGCTCCTCAATACAATGGATAATAGTCAACTTTTTTCTACTTTCATGGAGATCACAAAGTTAATGTCTTCCAGGGATGAGATTTATACTTTCTTAGAAACACATAATATAAAGGATGAACATAGTTTTAGTGACGTAATTTTATCTAGGAAAGCAAGAAAGTCCATGGACAGGTGGAAATTAGCTGTCCAATGGAGGCTCAAGTACAAGAAAGTCTTTTTTGATTGTATCTCTTATTGCAATGTAATACTAGATTCTTTTATATAG 1491 0.4064 MEQERQNLESFLSWAAQLGISDSTTRTNQSQHSLSSCLGSSLCVSHFPHTGGRGLGAVRDLRRGEIILRVPKSALMTTESVMEDKKLCDAVSRHSSLSSVQMLIVCLLYEFGKGKASRWHPYLMHLPHTYDILAMFGEFEKRALQVDEAIWVTEKATLKAKSEWKEAHVLMEDLMFKPQFLTFKAWLWAAATISSRTLHIPWDEAGCLCPVGDLFNYDAPGEEPSDVVDLECLLSNTSIRDTILLNGDKNIMVDAEQLDSHSQRLTDGGFDKDVNAYCFYARSHYNKGDQVLLCYGTYTNLELLEHYGFLLQENPNDKVYIPLEPAVYSSTSWSKDSLYIHHNGKPSFALLAALRLWATPQNKRRSVGHLVYSGSQLSADNEIFIMKWLLKTCDAMLKNLPTSLEEDTLLLNTMDNSQLFSTFMEITKLMSSRDEIYTFLETHNIKDEHSFSDVILSRKARKSMDRWKLAVQWRLKYKKVFFDCISYCNVILDSFI 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1992 496 CDD SET_LSMT 51 310 - -
Aed3g1992 496 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 4 481 - -
Aed3g1992 496 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 306 421 IPR036464 -
Aed3g1992 496 Pfam SET domain 52 296 IPR001214 GO:0005515
Aed3g1992 496 Gene3D - 311 491 IPR036464 -
Aed3g1992 496 PANTHER PROTEIN SET DOMAIN GROUP 40 4 481 - -
Aed3g1992 496 Pfam Rubisco LSMT substrate-binding 345 480 IPR015353 -
Aed3g1992 496 Gene3D set domain protein methyltransferase, domain 1 4 310 - -
Aed3g1992 496 ProSiteProfiles SET domain profile. 40 296 IPR001214 GO:0005515
Aed3g1992 496 SUPERFAMILY SET domain 7 314 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aed3g1992 SET 4.5e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1992 - - gmx:100787452 897.886