Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1983 GATTTGTTTCTCTCTACATTCGCAGCTGCAGCAGTCCAGAACCCTAGCGAGAGTGACAGAGAGGAAGAGTTCACATTCAAGCGCAGGAATGGAGGTCGCAATAAGCACGGCCGCGGCCACACCAAATTCATCAGATGCTCCAACTGCGGCAAATGCTGCCCTAAGGACAAGGCCATCAAGAGGTTTTTGGTGAGGAACATTGTTGAACAGGCTGCAGTCAGAGATGTGCAGGAAGCCTGTGTCTATGAACAATACACACTTCCGAAACTGTATGTGAAGATGCAGTACTGTGTTTCCTGTGCCATCCACTCTCATGTTGTGAGGGTTCGATCAACCACCGATAGGAGGAAGCGTGACCCTCCACAACGTTTCATCAGGCGCAGGGATGATGCACCAAGGCCTGGTCAGCCTGGTCAAGCACCACGACCTGCTGGCACAGGACCACCACCTGTCCGAACCTAA 462 0.5238 DLFLSTFAAAAVQNPSESDREEEFTFKRRNGGRNKHGRGHTKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSTTDRRKRDPPQRFIRRRDDAPRPGQPGQAPRPAGTGPPPVRT 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1983 153 MobiDBLite consensus disorder prediction 136 153 - -
Aed3g1983 153 Pfam Ribosomal protein S26e 25 129 IPR000892 GO:0003735|GO:0005840|GO:0006412
Aed3g1983 153 MobiDBLite consensus disorder prediction 109 133 - -
Aed3g1983 153 MobiDBLite consensus disorder prediction 109 153 - -
Aed3g1983 153 ProSitePatterns Ribosomal protein S26e signature. 96 103 IPR000892 GO:0003735|GO:0005840|GO:0006412
Aed3g1983 153 Gene3D Ribosomal protein S26e 24 137 IPR038551 -
Aed3g1983 153 PANTHER 40S RIBOSOMAL PROTEIN S26 25 153 - -
Aed3g1983 153 PANTHER 40S RIBOSOMAL PROTEIN S26 25 153 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1983 Aed-Chr3 23962332 23964533 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1983 24 139 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 81.897 2.32e-67 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1983 K02976 - gmx:100781822 218.394