Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1947 ATGGATCTCCTCCTCCTGGAAAAGACCCTCCTAGGTCTCTTCCTCGCGGCGGTGGTCGCCATTGCCGTGTCCAAACTCCGAGGCCGGAAGTTCAAGCTCCCCCCGGGCCCACTCCCCGTCCCCGTCTTCGGAAACTGGCTCCAAGTCGGCGACGACCTCAACCACCGCAACCTCACCGATCTCGCCAAGAAATTCGGCGACATCTTTCTCCTCCGAATGGGACAGCGCAACTTAGTCGTTGTTTCCTCCCCGGAGCTCGCGAAAGAGGTCCTCCACACGCAGGGCGTGGAGTTCGGCTCCCGCACGCGCAACGTCGTCTTCGACATCTTCACCGGAAAAGGCCAGGACATGGTCTTCACCGTCTACGGCGAGCACTGGCGCAAAATGCGCCGCATCATGACCGTTCCTTTCTTCACTAACAAAGTCGTGCAGCAGTACCGCCACGGCTGGGAGGCCGAGGCCGCCGCTGTCGTCGAAGACGTCAAAAAGGATCCCTCCGCCGCCATCTCCGGCACCGTCATCCGCCGCCGCCTCCAGCTCATGATGTACAACAACATGTACCGCATCATGTTCGACCGCAGATTCGAGAGCGAGGAGGATCCAATCTTCCAGCGCCTTAGAGCCTTGAATGGTGAGAGGAGTCGCTTGGCGCAGAGCTTCGATTATAACTATGGCGATTTTATTCCTATTTTGAGACCCTTCTTGAAGGGCTACTTGAAGATTTGCAAGGAGGTGAAGGAAACCAGGTTGAAGCTCTTCAAGGATTACTTCGTTGACGAGAGGAAGTAA 789 0.5703 MDLLLLEKTLLGLFLAAVVAIAVSKLRGRKFKLPPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRHGWEAEAAAVVEDVKKDPSAAISGTVIRRRLQLMMYNNMYRIMFDRRFESEEDPIFQRLRALNGERSRLAQSFDYNYGDFIPILRPFLKGYLKICKEVKETRLKLFKDYFVDERK 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1947 262 Gene3D Cytochrome P450 27 262 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1947 262 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 3 262 - -
Aed3g1947 262 PANTHER STEROID 21-HYDROXYLASE-RELATED 3 262 - -
Aed3g1947 262 Pfam Cytochrome P450 34 260 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1947 262 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1947 262 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1947 262 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1947 262 SUPERFAMILY Cytochrome P450 32 257 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1947 Aed-Chr3 23657814 23658602 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1947 1 262 Monolignol Biosynthesis Gene Families AT2G30490 81.679 2.54e-153 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1947 K00487 - gmx:100499623 489.574