Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1946 ATGCACAAAAAATGTGTTATTGGAACAGCAATTGAGACAACTCTATGGTCAATTGAATGGGGAATTGCCGAGCTAGTGAACCACCCAGAGATTCAGCAGAAGTTGAGGGAAGAGATGGACAGAGTTCTAGGAGCAGGGAACCAAGTGACAGAACCAGACTTGCAAAAGCTCCCATACCTTCAAGCAGTGGTGAAGGAAACACTCCGCCTGAGAATGGCAATCCCCCTCCTGGTCCCCCACATGAACCTCAACGACGCAAAGCTCGGAGGCTTCGACATCCCGGCAGAGAGCAAGATCCTGGTCAATGCATGGTGGCTCGCCAACAACCCGGCACACTGGAAGAAGCCGGAGGAGTTCCGGCCCGAGCGGTTCTTCGAGGAGGAGGCGCATGTCGAGGCCAATGGTAATGACTTCAGGTACCTTCCATTTGGTGTTGGAAGAAGGAGCTGCCCTGGTATCATTCTTGCATTGCCAATTCTTGGCATCACTTTGGGGCGTTTGGTGCAAAACTTTGAGCTCTTGCCTCCACCTGGACAGTCTCAGATTGATACTAGTGAGAAAGGAGGACAGTTTAGCTTGCACATACTCAAGCACTCCACCATTGTGGCTAAGCCAAGGTCGTTTTAG 627 0.512 MHKKCVIGTAIETTLWSIEWGIAELVNHPEIQQKLREEMDRVLGAGNQVTEPDLQKLPYLQAVVKETLRLRMAIPLLVPHMNLNDAKLGGFDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEEAHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEKGGQFSLHILKHSTIVAKPRSF 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1946 208 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 143 152 IPR017972 GO:0005506|GO:0016705
Aed3g1946 208 Gene3D Cytochrome P450 6 200 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1946 208 PRINTS P450 superfamily signature 141 150 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1946 208 PRINTS P450 superfamily signature 62 73 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1946 208 PRINTS P450 superfamily signature 9 26 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1946 208 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 9 208 - -
Aed3g1946 208 Pfam Cytochrome P450 9 198 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1946 208 PRINTS E-class P450 group I signature 61 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1946 208 PRINTS E-class P450 group I signature 102 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1946 208 PRINTS E-class P450 group I signature 150 173 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1946 208 PRINTS E-class P450 group I signature 140 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1946 208 PRINTS E-class P450 group I signature 18 44 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1946 208 SUPERFAMILY Cytochrome P450 9 206 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1946 208 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 9 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1946 Aed-Chr3 23655434 23656060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1946 9 207 Monolignol Biosynthesis Gene Families AT2G30490 88.442 1.94e-129 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1946 K00487 - gmx:100499623 378.637