Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1944 ATGGTAAATAATGGTTTATTGCAACGACCAATTTCAGTTTCAAAGAAGACTATTCAAAATATTACACCTAAGAGTAAGAGGTTACTCACACATAATGAAGATACTATGGAGTTGAGTGTTACATGGGAAGCAGCACAAAACTTGATTGGTCCACCGCCTAATGTCAATCCAAGTGTTGTAACAATTGATAACAATGAATTTGAGGAATTTGATCAACCACCTGTTTTTGGAAATGGGACTACAATCAATGACCACCAATTTGGGTCTTTGCGCTTTGCATCAAAGGAAATGAATCCAAAGGAATTAGAAAACATATCTAAAGATTCTAAAAGGCGAAGAATTGTAGAAAAACCTAAGTCAAACCAAGATCATGAGTCTCTTGGATTAGATGCACTAGCCACAGCAATCTTAGGTTATGATCATGTTGACCTTGCTGATGCAACGACAACAAAGCATCCAAGGCACCATTCTGGATGCACATGTATTGTGTGCATTCAACCCCAAAGTGGAAAAGGAACACACATGCCATCATGCACTTGCTTTGCTTGCACAACAATGAGGCGCCGATTCAGAACCCAAATGATGCTTAAGCAGCAATGCGAATCAGAGCATGAAGTAGATGCTACTCAAAAAGATTTGATTCATAACAATGATGACCAGGCAGATAATGGTGGTGCATCATCGAGAGACGGTGCATGTAATTTGGTGAAGGAAGGTAGAAGCCTAAATAGAATGGATGAACTTAGTGAAGGAAAAATAGACCTTAATAATCATCCCAATCATGAAGACATGCAGGTAGACATATGA 807 0.3879 MVNNGLLQRPISVSKKTIQNITPKSKRLLTHNEDTMELSVTWEAAQNLIGPPPNVNPSVVTIDNNEFEEFDQPPVFGNGTTINDHQFGSLRFASKEMNPKELENISKDSKRRRIVEKPKSNQDHESLGLDALATAILGYDHVDLADATTTKHPRHHSGCTCIVCIQPQSGKGTHMPSCTCFACTTMRRRFRTQMMLKQQCESEHEVDATQKDLIHNNDDQADNGGASSRDGACNLVKEGRSLNRMDELSEGKIDLNNHPNHEDMQVDI 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1944 268 MobiDBLite consensus disorder prediction 101 123 - -
Aed3g1944 268 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 93 266 - -
Aed3g1944 268 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 13 86 - -
Aed3g1944 268 MobiDBLite consensus disorder prediction 249 268 - -
Aed3g1944 268 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 93 266 - -
Aed3g1944 268 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 13 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1944 Aed-Chr3 23641387 23644525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1944 3 198 B3 DNA Binding Superfamily AT4G32010 37.500 9.54e-46 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1944 - - gmx:100782543 289.271