Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1935 ATGGAGCATCACTTGATCTCAGTCTTACCCTTTCTTTTATATTCACTAAGCTTCATCCTTTTTCTATTCCAGATTTTGAAAGTGAGAAACAAATCCAAACTCAAAACGTTGAACCTTCCACCAGGGCCATGGAAGCTACCTATAATTGGAAGTATACACCACATGATTGGCTATCTACCCCACCATCGCTTGAGAGAACTAGCCCTAAAACATGGCCCTCTCATGCACCTTAAACTCGGTGAGGTTTTAACAGTTGTGGTTTCTTCTCCTGAAGTTGCCAAAGATGTTATGAAAACCTATGATGCAGTCTTTGCTCAAAGGCCACATCAAGTTGGTGCAGACATCATCTGTTATGGTTCCACTGACATTGCCACTGCACCATTAGGAGGCTACTGGAAGCAACTTAGAAGAATATGCTCACAGGAGCTTCTAAGCAACAAACGTGTGAGGTCTCATCAATCAATAAGAGAACAAGAAGTGATGAATTTAGTGAGATTTATTGATGCCAACGTTGGATCTTGTGTGAACCTCAGTAAGAGAGTGTCTTGCATGACAAGTGGCATCACTGCTAGGGCAACTTTTGGTGAAAAGTGCAAGGACCAAGAAGAGTTCATTTCTTTGGTGAAGAAACTTGTGAAACTTGTCGAACGTTTGTTTGTTTTTGATATTTTCCCTTCTCACAAGTGGCTTCATGTGATCAGTGGAGAGATACCTAGACTAGAGGAGTTACATCGAGAATATGATGTGATCATTGGAAACATCATTAGAGAGGCAGAAAAAAAGATCATTGGTGAAGTGGAAGAAGTAGATAGTCTCCTATCTGTTCTTCTAAACATTAAAAAACATGATGCCCTTGAATATCCTTTGACAATCGACAACATCAAAGCTGTAATGTTGAACATGTTTGGTGCTGGAACAGATACATCATCAGCAGTTATAGAATGGGCCATGTCAGAAATGCTGAAAAACCCAAGAGTAATGACCAAAGCTCAAGAAGAAGTTAGAAGAGTTTTTGGTAGCAAAGGATACACCAACGAAGAATCAGCACTTGAAGAGCTACAATATCTGAAAGCAGTGATAAAAGAAACACTGAGATTGCACCCTCCATTCCCTCTCCTTCTCCCAAGAGAATGCAGAGAAACTTGTGAGATCAAAGGGTACACAATACCTGCTGGGAGCAAAGTGATAGTTAATGCATGGGCTATTGCAAGAGACCCTAAGTATTGGACTGAGCCAGAAAAGTTTGATCCAGAGAGATTCATCAATAATATGGATTCTCCAATAATTGATTATAAGGGTTCAAATTTTGAGTTTATACCCTTTGGTGCTGGAAGGAGAATATGCCCTGGAATTTCATTTGGTGTATCTAGTGTTGAGCTTTGTCTTGCACAGCTACTTTACTATTTTAATTGGGAACTTCCAAATGGAAACAAGGAAAATGGCAAGCTGGAAATGACTGAAGCTTTGGGGGCCTCTTCAAGAAGGAAAACAGATTTGGTCTTAGTTCCTATTTCTTACAATCCTGTTCATGTTTCATAA 1539 0.399 MEHHLISVLPFLLYSLSFILFLFQILKVRNKSKLKTLNLPPGPWKLPIIGSIHHMIGYLPHHRLRELALKHGPLMHLKLGEVLTVVVSSPEVAKDVMKTYDAVFAQRPHQVGADIICYGSTDIATAPLGGYWKQLRRICSQELLSNKRVRSHQSIREQEVMNLVRFIDANVGSCVNLSKRVSCMTSGITARATFGEKCKDQEEFISLVKKLVKLVERLFVFDIFPSHKWLHVISGEIPRLEELHREYDVIIGNIIREAEKKIIGEVEEVDSLLSVLLNIKKHDALEYPLTIDNIKAVMLNMFGAGTDTSSAVIEWAMSEMLKNPRVMTKAQEEVRRVFGSKGYTNEESALEELQYLKAVIKETLRLHPPFPLLLPRECRETCEIKGYTIPAGSKVIVNAWAIARDPKYWTEPEKFDPERFINNMDSPIIDYKGSNFEFIPFGAGRRICPGISFGVSSVELCLAQLLYYFNWELPNGNKENGKLEMTEALGASSRRKTDLVLVPISYNPVHVS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1935 512 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1935 512 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1935 512 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1935 512 Gene3D Cytochrome P450 32 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1935 512 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1935 512 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1935 512 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1935 512 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1935 512 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1935 512 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1935 512 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1935 512 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1935 512 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1935 512 SUPERFAMILY Cytochrome P450 37 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1935 512 PANTHER CYTOCHROME P450 71B11-RELATED 10 508 - -
Aed3g1935 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Aed3g1935 512 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 10 508 - -
Aed3g1935 512 Pfam Cytochrome P450 40 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1935 Aed-Chr3 23570037 23572120 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1935 11 503 Cytochrome P450 AT5G07990 39.881 7.39e-118 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1935 - K23807 gmx:100779851 862.062