Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1923 ATGGCACTTTCTTCTTCTTCTTCTTCAACATCCATATTTGCTTTCTCTTTGTTCATCACTCTTTTGCTTATAGGAAGTTCTTCAGCTCAACTCTCTGAGAACTTCTATGCTAGTAAATGTCCCAAGGTTTACTATGCAGTAAAATCCGTTCTTCAATCTGCTCTGGCTAAAGAACCTCGCATGGGAGCTTCTATCCTTGGAGGGCCATTTTGGAAGGTTAAAGTTGGTAGAAGGGATTCCACAACTGGTTTTTTCAACCAAGCAAGCAGTGGTGTGCTCCCAGGGCCAGGTTCTTCCCTCAGTGACCTTATCAAAAGATTCGAAGATCAAGGACTCTCTACCAAGGACATGGTTGCATTATCTGGAGCACACACAATTGGAAAGGCAAGGTGTGCAAGTTACAGAAGCCGCATATACAACGAAAACAACATAGACAGTTTATTCGCAAAGGCAAGGCGAAAGAACTGTCCAAATGGCAGCAATGGAACACCAAAAGACAACAACGTTGCACCACTAGACTTCAAAACCCCGAACCATTTCGACAACGAGTACTTCAAGAACCTCATCAACAAAAAGGGTCTTCTTCACTCTGATCAAGAGCTCTTCAATGGAGGATCAACGGATTCACTTGTGAAAAGTTACAGCAACAACCAAAAGGCCTTTGAGGATGATTTTGTTAATGCTATGATTAACATGGGAAACATCAAACCCTTGACTGGGTCAAATGGACAGATCAGGAAGCAGTGTAGGAGGCCCAATTAG 762 0.4291 MALSSSSSSTSIFAFSLFITLLLIGSSSAQLSENFYASKCPKVYYAVKSVLQSALAKEPRMGASILGGPFWKVKVGRRDSTTGFFNQASSGVLPGPGSSLSDLIKRFEDQGLSTKDMVALSGAHTIGKARCASYRSRIYNENNIDSLFAKARRKNCPNGSNGTPKDNNVAPLDFKTPNHFDNEYFKNLINKKGLLHSDQELFNGGSTDSLVKSYSNNQKAFEDDFVNAMINMGNIKPLTGSNGQIRKQCRRPN 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1923 253 Gene3D - 30 64 - -
Aed3g1923 253 PANTHER PEROXIDASE 65 252 - -
Aed3g1923 253 PRINTS Haem peroxidase superfamily signature 67 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed3g1923 253 PRINTS Haem peroxidase superfamily signature 173 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed3g1923 253 PRINTS Haem peroxidase superfamily signature 116 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed3g1923 253 PANTHER PEROXIDASE 72-RELATED 3 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed3g1923 253 PANTHER PEROXIDASE 72-RELATED 65 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed3g1923 253 ProSiteProfiles Plant heme peroxidase family profile. 23 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed3g1923 253 PANTHER PEROXIDASE 3 66 - -
Aed3g1923 253 Gene3D - 65 250 - -
Aed3g1923 253 SUPERFAMILY Heme-dependent peroxidases 30 253 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed3g1923 253 Pfam Peroxidase 62 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed3g1923 253 Gene3D Peroxidase, domain 2 94 232 - -
Aed3g1923 253 ProSitePatterns Peroxidases proximal heme-ligand signature. 116 126 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1923 Aed-Chr3 23498570 23502096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1923 14 66 Peroxidase AT5G58400 38.889 1.51e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1923 K00430 - gmx:100812478 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1923 3 23498570 23502096 Aed3g1923 3 23498570 23502096 ECH
Aed3g1923 3 23498570 23502096 Aed4g2185 4 24632971 24635381 ECH
Aed2g1007 2 7941500 7942688 Aed3g1923 3 23498570 23502096 ECH
Aed4g2185 4 24632971 24635381 Aed3g1923 3 23498570 23502096 PCT