Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1920 ATGGGTTCTCATCAACTCCAATTATCTTTCCTTGTGCTTGTTATGGTCACTTTGGCAACATTTATGATCCCTACCTTTGCTCAGCTCACTCCTAATTATTATGACAAAGTTTGCCCTCAGGCGTTGCCAATCATAAAGTCAATTGTTAAGAAGGCAATTATTCGTGAAAATCGCATTGGAGCGTCCTTGCTGCGTTTGCATTTCCATGACTGCTTTGTTAATATGGGTAACTTGAAGCCTCTTATTGGGCATGAGGGAGAGATTAGGTGCAATTGCAGAAAAGTCAACTACTAA 294 0.4048 MGSHQLQLSFLVLVMVTLATFMIPTFAQLTPNYYDKVCPQALPIIKSIVKKAIIRENRIGASLLRLHFHDCFVNMGNLKPLIGHEGEIRCNCRKVNY 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1920 97 Gene3D - 29 96 - -
Aed3g1920 97 ProSiteProfiles Plant heme peroxidase family profile. 28 97 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed3g1920 97 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Aed3g1920 97 PANTHER CATIONIC PEROXIDASE 73 96 - -
Aed3g1920 97 PANTHER CATIONIC PEROXIDASE 6 73 - -
Aed3g1920 97 SUPERFAMILY Heme-dependent peroxidases 10 73 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed3g1920 97 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed3g1920 97 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed3g1920 97 PANTHER PEROXIDASE 72-RELATED 73 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed3g1920 97 PANTHER PEROXIDASE 72-RELATED 6 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1920 Aed-Chr3 23471999 23474289 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1920 14 74 Peroxidase AT1G14540 50.820 2.72e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1920 K00430 - gmx:100810852 138.658