Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1913 CATACCCGATATCATACACGACTATGGCAAACCCATGCCATTCTCAAGCCTCATTGCTTCACTACCATTCACCCATCAAAAACTCAATTCATCCATCGCTTGATGCGAATCATGGTCTATTCTGGCTTTTTCTCTCAACACAATAATAGTAATAATGTCACCGACACCGAGAATGAGCTAGAAAAAGTGGAGTATGCTCTAACCGATGCATCTAAACTACTGCTTAGGAACCATCCCATGAGTGTGGCACCTTTATTGCATGCCTTCATCGATCCATCCTTTGTTTCAATACTACTAGGGCATCGCTTTTCTAACTGGTTCAAGAATGATGATCCTACACCATTTGAAACAGCACGCGGCATGACGTTTTGGGATTATGTTGGCTCTGATTCGAAACTCAAAAACTTGTTCAATGATGGCATGGCCAGTGACGTTCGATTGGTCTCAACTTTTTTGATTGACAAGTGTAGAGGGGTGTTCTTGGGATTGGAGTCATTGGTTGATGTTGGGGGAGGTACGGGGAACATAGCAAAGGTCATTGCTAATGCATTCCCTCATATGCAATGCACTGTGTTTGATCTTCCGCATGTTGTTGGTGACTTGCAAGGAAGTGAAAACCTCAAATACGTTGGAGGTGACATGTTTGAGACGATTCCCCCAGCGGATGCAATTTTGTTGAAGTGGATATTGCATGACTGGAGTGACGAGAAATGTTTGAACATACTGAAGAAGTGTAAGGAGGCAATTACGAAGGGAGGCAAAAAAGGGAAAGTAATTATCATTGACATGGTGGTGGATGATGAGAAGAGAGACGATGTATCAGTGGAAACACAACTCTTGTTTGATGTGTCGATGATGGTGTTGTTCACTGGAAAAGAGAGAAACAAGAAAGAATGGGTTAAGTTGATTTCCTCTGCGGGTTTCATTGACTATAAGATAACTCCAGCAGTTTTTGGCGTCAGGTCTCTCATTGAGATCTATCCATAG 987 0.4255 HTRYHTRLWQTHAILKPHCFTTIHPSKTQFIHRLMRIMVYSGFFSQHNNSNNVTDTENELEKVEYALTDASKLLLRNHPMSVAPLLHAFIDPSFVSILLGHRFSNWFKNDDPTPFETARGMTFWDYVGSDSKLKNLFNDGMASDVRLVSTFLIDKCRGVFLGLESLVDVGGGTGNIAKVIANAFPHMQCTVFDLPHVVGDLQGSENLKYVGGDMFETIPPADAILLKWILHDWSDEKCLNILKKCKEAITKGGKKGKVIIIDMVVDDEKRDDVSVETQLLFDVSMMVLFTGKERNKKEWVKLISSAGFIDYKITPAVFGVRSLIEIYP 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1913 328 Gene3D - 18 74 IPR036388 -
Aed3g1913 328 PANTHER O-METHYLTRANSFERASE 22 328 IPR016461 GO:0008168
Aed3g1913 328 Pfam O-methyltransferase domain 105 308 IPR001077 GO:0008171
Aed3g1913 328 SUPERFAMILY "Winged helix" DNA-binding domain 21 79 IPR036390 -
Aed3g1913 328 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 100 325 IPR029063 -
Aed3g1913 328 PIRSF O-mtase 15 328 IPR016461 GO:0008168
Aed3g1913 328 PANTHER O-METHYLTRANSFERASE 22 328 - -
Aed3g1913 328 Gene3D Vaccinia Virus protein VP39 75 328 IPR029063 -
Aed3g1913 328 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 328 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1913 Aed-Chr3 23409947 23411184 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1913 24 328 Monolignol Biosynthesis Gene Families AT1G51990 32.581 8.18e-46 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1913 - K16040 gmx:100781008 431.795