Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1904 ATGGCCTTAAGATCGAATCCCACATTGTCCTTAAACACATCCCATTACATTTGCGAGCAGACAACTGAGTTTAACCGTTATCCAAAAGGAATGTTTTACAATGACAACCCTTTAAACTACACGTTTACAGTGGTCTCTCTGCAGGCCTCCTTAGTCTGTATGACCACCTCATCGTTGCAATTCGTTCTTCTCCCATTTGGGGAGCCTACCTTCATTACACAAGTGCTGGCAGGGATGCTATCAGGACCATCATTATTGGGAGAAATAAAAAACATTAAAGAGTTGGTCTTCGCCCCAAAACCATTCTACGTATGTGAAACAATCTCTCTTTACGGGACCATGATGTTCTTGTTCTTGGTGTCAGTGAAAATAGACATATCTATGGTAATGAGAATGGAAAAAAAGACATTGGCCATTGGGGCGTGTTCTTGTTTATTGCCACTCGTATTAACAATGTGCACTGCTTTGGTTTATCGGAAAATTTTGTCCCCAGGAACGGACCTCTACAAGTCCCTATTTCTTGTTGCAGCTTTTTCGTCAACTGGTTCCTTTATAGTCGTTACCAGTGTTCTTGAAGACTTCAAGCTCCTAAACTCAGAGGTTATTGGGGAGCACTACGTAATTGGGCCAATTATTCTAGGGCTAGCAGTTCCAGAAGGTCCACCACTTGGATCAGCATTGGTAGAGAGGCTAGATACCTTGAACTCAACATTGTTTTTGCCATTGTACTACTTCTGTAGTAGTGCCAGATTCAAGTTCCGTCAAGTCGATCTCTATAGCTTTGCAATTGTGCAACCTATTGCTATAGTTGGCTTCTTTGGGAAGATGGCAGGAACCATGTTACCCTCACTCTATTGCAACATGTCACTCGTTGATGCTCTCTCCTTAGGTCTCATCATGAGTTCCCAAGGCTTCACGCAGTTGCTTCACATGCAAACAGCTTCCACTCCAATGGTGAAATTTCTGTATGACCCATCTAAGAGTTACTTGTCCATAACTAGGAGGAGGACCATTGAGCATGCTCCTCCCAATACCATGCTTTCCTTGATGGCATGCATACACAACAGTGAAGAAAGCACCGCACCTATGATCAATTTTCTAGAAATGTCCAACTCTACAATTGAGAATCCCATTTGCTTCCATCTTCTACACCTCCTTGGGCTAAGAGGTAGAACAGTCCCAGTTTTAATAGACCATCAATCCAAGAACAAGGATAGTACTAATCTGGATTCCAAAAACTCACAGAGCATAATAAACGTCTTCAAATCATACGAGCAACAGAACATGGGCAACGTGATGGTGAAAATCTACACATCCATCTCCCCTTACGAGACAATGCACCACGAGATATGCATGCAAGCTGCACTGAAAACAGTGTGCATGTTGATTGTGCCGTTTCACAGGCACTACTTGACATCAAACCAGGTCATGGAATCAGCACACTGCATTAGAGCATTGAACTGCCACTTGCTACGAACCGCGCCATGCTCCGTTGGGATCCTAGTCGAACGAGGAAACTTGACTAGGATTAACCCTTTAACTGGTGCTCCTTCTACAACGTTGGTGTTGTGTTTATAG 1578 0.4335 MALRSNPTLSLNTSHYICEQTTEFNRYPKGMFYNDNPLNYTFTVVSLQASLVCMTTSSLQFVLLPFGEPTFITQVLAGMLSGPSLLGEIKNIKELVFAPKPFYVCETISLYGTMMFLFLVSVKIDISMVMRMEKKTLAIGACSCLLPLVLTMCTALVYRKILSPGTDLYKSLFLVAAFSSTGSFIVVTSVLEDFKLLNSEVIGEHYVIGPIILGLAVPEGPPLGSALVERLDTLNSTLFLPLYYFCSSARFKFRQVDLYSFAIVQPIAIVGFFGKMAGTMLPSLYCNMSLVDALSLGLIMSSQGFTQLLHMQTASTPMVKFLYDPSKSYLSITRRRTIEHAPPNTMLSLMACIHNSEESTAPMINFLEMSNSTIENPICFHLLHLLGLRGRTVPVLIDHQSKNKDSTNLDSKNSQSIINVFKSYEQQNMGNVMVKIYTSISPYETMHHEICMQAALKTVCMLIVPFHRHYLTSNQVMESAHCIRALNCHLLRTAPCSVGILVERGNLTRINPLTGAPSTTLVLCL 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1904 525 PANTHER CATION/H+ EXCHANGER 2 12 201 - -
Aed3g1904 525 PANTHER CATION/H+ EXCHANGER 2 314 514 - -
Aed3g1904 525 PANTHER CATION/H+ EXCHANGER 2 199 315 - -
Aed3g1904 525 Gene3D - 201 319 IPR038770 -
Aed3g1904 525 Gene3D - 44 200 IPR038770 -
Aed3g1904 525 PANTHER CATION/H + ANTIPORTER 12 201 - -
Aed3g1904 525 PANTHER CATION/H + ANTIPORTER 314 514 - -
Aed3g1904 525 PANTHER CATION/H + ANTIPORTER 199 315 - -
Aed3g1904 525 Pfam Sodium/hydrogen exchanger family 62 200 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1904 Aed-Chr3 23339682 23342069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1904 197 506 Antiporter Super Family AT1G06970 32.738 3.91e-52 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1904 - - gmx:100790969 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1904 3 23339682 23342069 Aed3g1904 3 23339682 23342069 ECH
Aed4g2198 4 24711842 24714673 Aed3g1904 3 23339682 23342069 PCT