Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1898 ATGACCCCTTTGACCATCCAAATGTCGACTAGATGGCTGATGCTGGTAGCTGTATGGAGATATGTTGGTCTTGTTTCAACTATTGTTGGACTAGTCTGTTATGGCCTCAGCTCCTCCTTCAACTCTCTCTTTGGAGACTGGAGCTTGATGAAGATCTTTCTTTACAGTGTTTTCAGTCTCTTTATCTGTCTTTGGACTCTGTTTGCAAAGGTATGGCAACACTCAACCAGTCTCCGATTCAAAGCTCATGGGGTATTATGTATTTTGAGCATCACATCCGTGTATTCCTATTTCGCGGATAAAGCTGTGAAGGGAAAACCAGATGTGTATAGCTTGATTTCATGTGTTGCCTTTGCTATCATGTCACTCAGCCTCTCAAGGCAAACTCAGTGTGGATTTGAACTGGAATCTTTTTATTTTTTTCTGGGATGTCTAATAGTACTGTTGATGAAGATTAAATTGGCATTAGTTATTGTTGGAGTAGGTTTCAGCTATGCCCTTATTATTCTTCGTTCCTACTTAAACACCACATCATACGAGCATGTTGGGGTCCAAGAGATGCATGATTCTGTTGTGATTGATGTTAATTCGCAATGCATTGATGATAATCCTGGTATGATGCAACTACTCATGGCTTGTACGAAGGAGCTTCAGCAGAGAAATTCGAAGCTCAGCAACATGCTTTCTAAGCTTGTGAAGGAACACCTTGAAGATAATTCTAAACCAGAAGTAATTGACAGTAACTTTGTGATCGATGCGCTACCATTGGGAAAAATAAACGACCTTCGCAAAACCATAAAGCTGATGATCGACGTCGGGTTTGAAAAGGAATGCTGTGAGGTGTACTCTAATTGGCGGAGGGAAAGCTTAAAAGAGTGCTTAACAAATTTATTAGGATTGCCAGAGATGAACGTCGAGGAAACAAAAAATTGCATTATTAGAAGACGTACTGAGGCTATGAATGTCGTTCTTAAAACACTAATTCCCAGTGAGCGACGACTCTGTGATAGCGTCTTTGGGGAATTCTATTCTGTGGCTAATCTTTGTTTCGCTGATGTTTGTCGGGGAGCCTCGATTCAATTGCTGAATATTGCCGTTGTGTTTGCGAGTGGGAGCCCTTCGAACTGGCGTTTGTTCGAAATCATTGGCATGTTTGAGGCATGGTGTCTCCTACTTCCTCCTGAGTTTCCGTCATTGTTTTCAGAGTCACTGGTAGTGAAAGCAATGGCAATCCACGACGAATTAGGAGATGCAACCAGAAACCTTCTTATGAAAGTGATAAGAATGATTTCCCATTACCGAATGGTTCTGGGTATGGCCTTTAATTGCCATGTTCATGTAATGACCATCAATGTCATGAGCTACGTCATTTCTACCAGTGGAGCTGGAAATTCTTCACTTTCTGTGCAGATTGTTCGAATAATGAAGCATCTAGAGAGAAAATTGGTGGCAGAGGGCAAAAATATGAAACCTGAAGCACGGTACTTTTTCATGATGAATAATTGGAGGTTCGTAGAGCTGACCGCAGAAAATTCAAGGTTAGACGTTGATTGTTTCAAAAAATACACAATCAAAGTTCAACAAAACCTCAAACTTTATCAAAGAAGCTCTTGGAATGTGGTGCTAGACTTGTTGAAGCCAGAGAACAATGATCAGTTTGTGGAGCCTAATGCTGAAGCAGAGTCTATGAAAGACAACCTCAAATTGTTCAACAACCACTTTAAGGATATATGTGGCATTCAATCTAGATGGGTTGCCTTTGATATGCAGCTGAGGGAACAAATAATAATGTCACTGGAAAACATCTTGTTGCCAGCATATGGAAACTTCATTGGGAGGTTCCAAAATATTCTTGGTAAACATGCTTATGAGTACATTAAATATGGAATGTTTGATATACAAGACCAACTCAACCATTTGTTTTTGGGAAGCAGGCCAATGAATCAGTACATAAAAGAGAAGGATAAACTCTTAATGTTTGTATCTCACTTCTTATCATAA 2001 0.4008 MTPLTIQMSTRWLMLVAVWRYVGLVSTIVGLVCYGLSSSFNSLFGDWSLMKIFLYSVFSLFICLWTLFAKVWQHSTSLRFKAHGVLCILSITSVYSYFADKAVKGKPDVYSLISCVAFAIMSLSLSRQTQCGFELESFYFFLGCLIVLLMKIKLALVIVGVGFSYALIILRSYLNTTSYEHVGVQEMHDSVVIDVNSQCIDDNPGMMQLLMACTKELQQRNSKLSNMLSKLVKEHLEDNSKPEVIDSNFVIDALPLGKINDLRKTIKLMIDVGFEKECCEVYSNWRRESLKECLTNLLGLPEMNVEETKNCIIRRRTEAMNVVLKTLIPSERRLCDSVFGEFYSVANLCFADVCRGASIQLLNIAVVFASGSPSNWRLFEIIGMFEAWCLLLPPEFPSLFSESLVVKAMAIHDELGDATRNLLMKVIRMISHYRMVLGMAFNCHVHVMTINVMSYVISTSGAGNSSLSVQIVRIMKHLERKLVAEGKNMKPEARYFFMMNNWRFVELTAENSRLDVDCFKKYTIKVQQNLKLYQRSSWNVVLDLLKPENNDQFVEPNAEAESMKDNLKLFNNHFKDICGIQSRWVAFDMQLREQIIMSLENILLPAYGNFIGRFQNILGKHAYEYIKYGMFDIQDQLNHLFLGSRPMNQYIKEKDKLLMFVSHFLS 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1898 666 Pfam Exo70 exocyst complex subunit 462 638 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aed3g1898 666 Pfam Exo70 exocyst complex subunit 315 456 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aed3g1898 666 Gene3D Exocyst complex component Exo70 197 649 - -
Aed3g1898 666 PANTHER EXOCYST COMPLEX PROTEIN EXO70 10 643 IPR004140 GO:0000145|GO:0006887
Aed3g1898 666 Coils Coil 214 234 - -
Aed3g1898 666 SUPERFAMILY Cullin repeat-like 219 641 IPR016159 -
Aed3g1898 666 PANTHER PROTEIN, PUTATIVE-RELATED 10 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1898 Aed-Chr3 23297199 23299199 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1898 244 644 EXO70 exocyst subunit family AT5G58430 39.679 2.14e-79 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1898 - - gsj:114383642 936.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1898 3 23297199 23299199 Aed3g1898 3 23297199 23299199 ECH