Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1897 ATGCCAGTACAGAAAAAGCTATGGAGAATTATGGGATTTTTGTCAAGTGTGATTGGACTAATCTGTTACGCGTTGAGTTCCTCTTTCAACCATCTATTTGGAGAGTGGAACTTCTTGAAGATCATCCTTTACACCGTGGTTAGTATCTCAATCACCAGCATCATGTTATTTTCAAGGAGATGGAAACGTTCCATTAAGAGTTCTATGCTAAAAGCCCATGCGGGTGTTCTGGTTTTGTTGCTCACTTCTTTGTACTCTTTCATATCCGACAAAGCTGTGAATGGAAAACCAGACATGTTGAGTTTGATTTCGTGTGGAGCCTTTGCTCTAATGTCTTTGTGTCTGTCAAGGCAGATTGGCCTTGGGTTCGAAGCAGATCTCCTCAATTTCTTCCTTGGATCTCTAACTGTTCAACTAATAGAGATCAATTTGATGCTCTCTATTGTTGCAGCCATATTCTGCTACTGTTTTGTAGTTCTTCGTCCCAAATTGGATTCTCAATCACAGATTAGAACTGAAGAGGTGGAAGACCATGTAAACATAGAAATTGATGACAACATAAGTGATGACTTCCAATCTAATCAACATAGCAGTATTGGCCACCAACAAATATCGTTGCTAAGAATGGTGGGTGATGGTTACAATTGGAAAAAATATGAAGATGAAGTAGTGAAAGGAAGTGAAAATCAGATAAGTTATTACAAATGCACACACCCCAATTGCTATGTGAAGAAAAAAGTTGAGAGAACTGTGGAGGGGGAAATTATTGAGATACACTACGAGGGTACTCATCCACATTGCAAGCGTATGCATAATATGAAGAGGAACTCTTCATCTGAAAATTTATATTCAGTGTTACATTCAGAGCCTGCTACCTTGCCAGATCAATCATTTGCCCCTCAGGACAGTGGACAATTGGATTATGGTGTGCAGCACCGGAGAAATCCTCAATATCCACATGATATATGA 969 0.3942 MPVQKKLWRIMGFLSSVIGLICYALSSSFNHLFGEWNFLKIILYTVVSISITSIMLFSRRWKRSIKSSMLKAHAGVLVLLLTSLYSFISDKAVNGKPDMLSLISCGAFALMSLCLSRQIGLGFEADLLNFFLGSLTVQLIEINLMLSIVAAIFCYCFVVLRPKLDSQSQIRTEEVEDHVNIEIDDNISDDFQSNQHSSIGHQQISLLRMVGDGYNWKKYEDEVVKGSENQISYYKCTHPNCYVKKKVERTVEGEIIEIHYEGTHPHCKRMHNMKRNSSSENLYSVLHSEPATLPDQSFAPQDSGQLDYGVQHRRNPQYPHDI 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1897 322 MobiDBLite consensus disorder prediction 293 310 - -
Aed3g1897 322 Pfam WRKY DNA -binding domain 212 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g1897 322 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 3 274 IPR044810 GO:0003700
Aed3g1897 322 Gene3D WRKY domain 196 268 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed3g1897 322 ProSiteProfiles WRKY domain profile. 205 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g1897 322 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 3 274 - -
Aed3g1897 322 SUPERFAMILY WRKY DNA-binding domain 208 266 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed3g1897 322 MobiDBLite consensus disorder prediction 293 322 - -
Aed3g1897 322 SMART WRKY_cls 210 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1897 Aed-Chr3 23295042 23296010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1897 177 274 WRKY Transcription Factor Family AT4G26440 47.959 1.33e-22 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed3g1897 WRKY 1.9e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1897 - - gmx:102667674 499.59