Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1896 ATGACTTCTTTGACCACCCAGATCACGAGATTGCTGAAGAAGGAAGCCGTGTGGAGATTTGTCGGGTTTTTTTCAGCTATCGTTGCCCTTCTTTGTTATGCTCTTGGCTCCTCCTTCCACTACATGTTCGGAGAGTGGAACTTGTTGAAGGTCTTTCTCTACAGTCTTTTCAGTCTCTCCATCTGCCTTTGCTGTCTGTATCCAGATGTATGGCGATTTCTATTTTTTAGTGACTTGATCAAAGCTAATGCAGCTTTCTTGGTTATGAGCATCACAGCTCTGTTTTCCTACTACGCCGAGAAACGCGGTAAAGGGAAACCAGATGCATATAGCTTGATTTCTTGTGTTGCCTTTGCTGTCATGTCATTCAGCCTCTCAAGGCAAACCCAGTGGGGATTTGAAATGGAGCTTTTTAATTTTTTCCTGACATGTTCAATAGTGCTGCTCATGGATATTAAAGAGCCATTAATTCTTGTCGGAGTAGTTTTTGGCTGTGCCTTTATTAATTTCCGTCGCTACTTAGATAAACCATCATACGAGCTTGGAGTCCGAGATGAGGATCCTGTAGTGATTGATGTCAATATGCAACAAGTCATGGCTTGCATCAGGGAGCTTGAGCAGGGCAATTCGTATGCCACGAACTTGCTTATGGAGCACACGAGGGAATACCGTAGGCTTGGAGGCAAATGTGAACTACCTGCTATGGACCCTAACTTTGTGATTGATGCACTACCATTGGGAAAAATCAACGACCTTGAGGAAACTATAAAGCTGATGCTGGGTGACGGTGATGGGTTTGAAGAACAGTGTCGCGAGGAGTACTGTAATTGGCGAAGGGGATGCTTAGAGCAGTGTTTATTACATTTATTTGGGTTGCAAGAGATCATGATCAACACTGCTGTGAAGGAACGTTCACAGTTTGAATTAGTGTGCATTATCGTTGGAGGGTGGAGTAAAGCTGTTATGGTTGCTCTCAAGATAATATTTCCCAGTGAGCGACGACTCTGTGATCGTGTCTTCTCAGGGTTCCACTCTGTTGCTGATCATTGTTTCACTGAAGTTTGTGGAGGAGCCACGGTTCAATTGCTGAATTCTGCCTACGAGGTTGGGAGCTCTTCGGAGTGGCATTTTCCTTTGTCCGAAATCCTTGACATGCACGAGACATTGAGTGACCTAATTCCGGAGTTTCAATTATTGTTTCCGGAGTCACTGGGAAAGGCAGCAATGACAGTTCACGACAAATTAGGAGAAAGATGCATTGACATTTTCATGCAAATGGAAGATTGTGTTTTTCGTAACCCATTCGTGAATGTAATTGTTCGGCCTGATGCCACGGATCATCCAATGACTCGTTATGTCATGGACTACTTAGAGAAAGCTTTAAAAAACTTTCTTAAGTTTGCTGATGGAACGGGAAAATCTTCTTCATTTTCTGATCAGGTTGATCGAATAATGAAGCGATTGGAGAGAGAAGTGGTGGGGTCCAAAAACTACAAGTACCCTGCTTTACGCCACCTTTTCATAATGAACAATTGGAGGTTCATGGAGCGAAGGGCAGCAGAGTTGGGATTAGACAACCTGGTTTTTTTTCCAAAACAGTGCGACGATAATTAG 1614 0.4349 MTSLTTQITRLLKKEAVWRFVGFFSAIVALLCYALGSSFHYMFGEWNLLKVFLYSLFSLSICLCCLYPDVWRFLFFSDLIKANAAFLVMSITALFSYYAEKRGKGKPDAYSLISCVAFAVMSFSLSRQTQWGFEMELFNFFLTCSIVLLMDIKEPLILVGVVFGCAFINFRRYLDKPSYELGVRDEDPVVIDVNMQQVMACIRELEQGNSYATNLLMEHTREYRRLGGKCELPAMDPNFVIDALPLGKINDLEETIKLMLGDGDGFEEQCREEYCNWRRGCLEQCLLHLFGLQEIMINTAVKERSQFELVCIIVGGWSKAVMVALKIIFPSERRLCDRVFSGFHSVADHCFTEVCGGATVQLLNSAYEVGSSSEWHFPLSEILDMHETLSDLIPEFQLLFPESLGKAAMTVHDKLGERCIDIFMQMEDCVFRNPFVNVIVRPDATDHPMTRYVMDYLEKALKNFLKFADGTGKSSSFSDQVDRIMKRLEREVVGSKNYKYPALRHLFIMNNWRFMERRAAELGLDNLVFFPKQCDDN 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1896 537 SUPERFAMILY Cullin repeat-like 233 524 IPR016159 -
Aed3g1896 537 Pfam Exo70 exocyst complex subunit 317 527 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aed3g1896 537 Gene3D Exocyst complex component Exo70 191 531 - -
Aed3g1896 537 PANTHER EXOCYST COMPLEX PROTEIN EXO70 14 524 IPR004140 GO:0000145|GO:0006887
Aed3g1896 537 PANTHER PROTEIN, PUTATIVE-RELATED 14 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1896 Aed-Chr3 23283615 23293784 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1896 233 515 EXO70 exocyst subunit family AT5G58430 40.878 1.44e-51 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1896 - - gmx:100788866 494.967