Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1894 ATGCTTGTACTCACCGAAATTCAGAGTTGTCTACTACAACCAAAGGTATGCAAAGTTGTGTGTTTCATTTCATCTGTTGTTGGATTTGTCTGTTACGCTCTCAGTTCTTCTTTCAATGATTTATTCGGAAAGTGGAACTGGTGGAAGATATTACTCTATATTGGTTTTAGTTTTGTCGTCTCCCTTATCGTCTCATTGGCAAAGGCATGGGAGAGTTCCACCTCTCGCCGGCTGAAAGCTCATACGACCTTCTTAACTTTGCTGACCACTGCTGTTTATTCTTTTTTCTTCGATAAAGAAGTGAAAGGGAAACCAGATGCATATAGTCTGGCTTCCTCTGCAGCATTTGCTGTCATGTCTTTGGGATTGTCAACACTGAGTCACTTTGGATTTGAGGTTGATCTACTATTTTTTTTCAGTGAACTTCTAATCATACAACTCATGAAAATAAAATTATGGTTGGTCATTGTTGGTGGGAGTTTCTGTTATTCCCTCGTCATTCTACGTTCCAATTTGAATCCTCCACCAGGGAGTCAGTCAGTTTGGTCTCGAGACCAAAATTATACATTGATTCATATAGATCCTCCAGAAAATCTGGTCACTAGAACTGCTTGGTTTTCAAGAGAATCCGATCCTAGTGTTACTGTCAAGGCAGAGTTCATGCGTTGTATAGATACGCTTAAGAAGGAGAATGGGAGTGTCATCGCCACAATTTCAAAGCATGTAAGCGAAGATCTTAAAGTTAAAGCTAACTTTATCGACGAGGACCAGATTTCAGTGTCGGTTTTGGAACGGGATGACAACTTGTTGATGGATGTGTTACCGGAGGAAATTGTCATTGACCTTCATCAAAGCATAAAGCAGATGGTGTTAGAAGGGTTTAAGAACGAATGCTTACATGTGTACACTAATTGCCGGAGGGAGTTTTTGAAAGAGACTCTATCCACATTCAGGTTGCAATTTCTAGAGCTTAACATGGAGGACATTGACAAGATGGAGAAGATTGAGAGTTGGATGAAGGCTTTGAACGTGGCTGTCATGTTACTTTTTCCTAATGAAAAAAAACTCTGCAATCGTCTCTTTAGAGGCTCCATTGCCTCCAGGGAGTTTGCTTTGACGGAGGTTTGCAGAGAATTGGCGACTAGTCTACTGAGCACTGCCGAGGCCATGGCAACTTGGAGCCGTTTCATGCCCAAGACATTGCAGAAGCTGATACAGGAGTTCGAACCGGAGTTTTTAAATGAGCGAGGTCAATCACTCAGAGCCAATGCAGTAATCCTGATTGAGCTGAGATTGAGCATTTTCGAGGTATTGAAAAACGTATCACTTGTTCCCGGTGGTGGGCTTCACCGTGTTAGCCGTGATGTGATAAGGACGATAGAGCTGCTCGCGAGCAGTTTGGCTGCCAACTCCAAAATCTACAACAATCCTACTCTGGCTAATGATTTCATCATCGACAATAGTAGGTTCATCAAACTGAATGGATTTGGATTTGGATTTGGCAATGATTGGTTCCGATATACGGAATTCCAACAACAGCTTCAGCTCTATCTGAGCAGCTCATGGAATAAGATTCTGAACTTTTTGAAGCTGGACATCCATGACTCAGAGCCTAACATTGAGTTAATGAAAGACAAACTGTTTTGGTTCAACGAACACTTTGATGAGACATGCAACGTTCAGTCTGCGTGGTCTGTCGTTTATAAGGAGTTCAGGAAGGAAATAATAAAATCCATAGAAGAAATGTTGTTGCCAGCATATGGAAAGTTCATTGGGAGGTTTCAGGAATTTCTTGGTAAGCACGCTTATGAGCACATTAAGTATGGAGTGGTTGAAGTTAAAGAACGACTCAACAATTTGTTTCTTGTAGATGCCCCAGGCACGAGATGGGAAAACACCTTAGTTTGCGTGCCTTCTGAATAA 1923 0.4171 MLVLTEIQSCLLQPKVCKVVCFISSVVGFVCYALSSSFNDLFGKWNWWKILLYIGFSFVVSLIVSLAKAWESSTSRRLKAHTTFLTLLTTAVYSFFFDKEVKGKPDAYSLASSAAFAVMSLGLSTLSHFGFEVDLLFFFSELLIIQLMKIKLWLVIVGGSFCYSLVILRSNLNPPPGSQSVWSRDQNYTLIHIDPPENLVTRTAWFSRESDPSVTVKAEFMRCIDTLKKENGSVIATISKHVSEDLKVKANFIDEDQISVSVLERDDNLLMDVLPEEIVIDLHQSIKQMVLEGFKNECLHVYTNCRREFLKETLSTFRLQFLELNMEDIDKMEKIESWMKALNVAVMLLFPNEKKLCNRLFRGSIASREFALTEVCRELATSLLSTAEAMATWSRFMPKTLQKLIQEFEPEFLNERGQSLRANAVILIELRLSIFEVLKNVSLVPGGGLHRVSRDVIRTIELLASSLAANSKIYNNPTLANDFIIDNSRFIKLNGFGFGFGNDWFRYTEFQQQLQLYLSSSWNKILNFLKLDIHDSEPNIELMKDKLFWFNEHFDETCNVQSAWSVVYKEFRKEIIKSIEEMLLPAYGKFIGRFQEFLGKHAYEHIKYGVVEVKERLNNLFLVDAPGTRWENTLVCVPSE 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1894 640 SUPERFAMILY Cullin repeat-like 266 621 IPR016159 -
Aed3g1894 640 Gene3D Exocyst complex component Exo70 503 621 - -
Aed3g1894 640 PANTHER PROTEIN, PUTATIVE-RELATED 8 622 - -
Aed3g1894 640 Gene3D Exocyst complex component Exo70 198 465 - -
Aed3g1894 640 Pfam Exo70 exocyst complex subunit 337 404 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aed3g1894 640 Pfam Exo70 exocyst complex subunit 453 618 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aed3g1894 640 PANTHER EXOCYST COMPLEX PROTEIN EXO70 8 622 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1894 Aed-Chr3 23272605 23274592 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1894 251 629 EXO70 exocyst subunit family AT5G58430 35.255 3.18e-67 229