Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1889 ATGGTAACTTGCCATTGCCTTTCGGCGAAATCTCCATCACAGTGTTGGTGTTGGTTAATGGCTGAATGCAAATCTTGCTTACTTGACAAGGAATATGATGCTCCTGCTGGACCAAATTGTGAGATAGGTGATGCAACCAAAAGTGTGGAGATTTGTATGTTTTGCTTCGTCTGTTGTTGGACTGCTCTGTTACGCACTCAGCCCCTCTTTCAACCATTTATTGGGAAAGTGGACCTGGTGGAATTTCTTTATTTGCGTTACCTTCTTGATCACAACAAGAAGACAGCGCTCCACCTCTCTCAGGCTAGAAAATCATTTGGCATTTTTGTAAATGGTGGTAAAGCAGATGCATATAGCCTGATCTCATATGCCTCTTTTGCTATCACGTCTCTAGGCTTGTCAAGATTGACTCAATTTGGATTTGAGATTGATCTCCTATATTTCTTCTGTGGAGGTCTAATAATACAACTCATGAAGATACATTTATGGTTAGGCATCATTGGCGGGAGTTTCAGTTATTTCCTCGGCATTCTTCGTTCCTCTTTGGACATGCCAGAGGAGCATATTCGATCCCAGGTCCAAGATCAAGTAATCATTCGAATTGATTCAGATTCAGTAGAAGATGTTAATGCTGATGATCATGATGGCACGCCAGGGAATGGCGATGATCTTGTCTGGCAACAGCTCATGGATTGTATAAAGGCGCTTGAGAAGGAGAATGAGACGCTTGTTCCCATGGTATGCAGTCATCTGGACAAACACCTTAAAGCCACGGTTGACTCCGAATTCAAAGACGAGAACCAGATTCCAGAGCCTCAAGTGGATCCTGACGTGAACTTGGTGATGGATGAACTGCTGCCATCAGGAATTATAACGCGCCTTCGTGACACCGTGAAGCTAATGATGGAAGCTGGGTTTGAGGAGAAATGCCGCGACGCGTACAGCAATTGGCGAAGGGAGTTTCTAGAACAGTGTCTGTCGGCACTTGGGTTGCAATTGCAAGCGCTCGACATTGAGAATTGGATAAAAACTTGCAAGGCAGCTGCCAAGATACTGTTTCCCAATGAAAGAAGACTCTGCGATTACGTCTTCCCGATGTCCTCTTTTGCTGCAGATGTCTGTTTTATGAAGGTTTGCGAGGAATTGATGATTTGCCTACTGAGTTTTGCCGATACCATCATAACAACAGGGAGCTATTTGCCAAATCTTTTGTTCAACATCATCCCTCAAATGTCCAAGTCGTTGCACGAGCTGGATAGGGTGTTAGAGAGTGCTTATAAGAAGGACTTTATGTGGCTCGAAGCCTATACTAAAATGGTTCAAAAAAGATTTGATATTTTAAAGAAGTTTGCAAATGTTGTTTACCGTGATAGTGATACTCAAGCAACTGTTGCCAGCGGAGGGCTTCACCCATTTACCCTTCAAGTAATGAACTATATCCATAGTATTCTCCCACCTTTACGGGGATCTGTCCAAGGATATAGGATGATTCCTGGTAGAGAGGGGAAAAAATCTTCATTTTCTCAGCTGCTAGCCAGGATGATAGAGTTGTTAGAGAGCAATTTGGAAGCCAAGTCCAGAGACTACACTGACCCTGCATTGGCCTATCTTTTTATGATGAATAATCTGAGGCACATAGGACAGGAGGTGTATACATGGAGCGGAACAACCATATTTGATTATTATTGGTTCGGACAACACGCCACAAAGGTGGAACACAACTTGAAACTCTTTCAAAGACACTCCTGGGATAAGATGCTGGACTTTTTGAAGCTAGAGCAGTACGAGTCAGTGGCACCTAATGTGGTAGCAGAGTCAATGAAAGATAAGCCCAATTTGTTCTTCCAGAACTTTGAGGAGATATGCAAGGTTCAGTCTACATGGATTGTCTCCGATACACAACTAAGGAAACGAATAATAAAATCCATATACAGCGTCTTGTTGCCAGCATATGGAGAATTTACTAATAGGTTTCGAGATGTTTTTGGTAAGCATGCTGATGAGTATATTGAGTATGGGATTGTACAGATTGAAAATGGTCTCAGTCATTTGTTTCTTGTAAGGGATCCAATGCTGGAATACGTTTGA 2088 0.4267 MVTCHCLSAKSPSQCWCWLMAECKSCLLDKEYDAPAGPNCEIGDATKSVEICMFCFVCCWTALLRTQPLFQPFIGKVDLVEFLYLRYLLDHNKKTALHLSQARKSFGIFVNGGKADAYSLISYASFAITSLGLSRLTQFGFEIDLLYFFCGGLIIQLMKIHLWLGIIGGSFSYFLGILRSSLDMPEEHIRSQVQDQVIIRIDSDSVEDVNADDHDGTPGNGDDLVWQQLMDCIKALEKENETLVPMVCSHLDKHLKATVDSEFKDENQIPEPQVDPDVNLVMDELLPSGIITRLRDTVKLMMEAGFEEKCRDAYSNWRREFLEQCLSALGLQLQALDIENWIKTCKAAAKILFPNERRLCDYVFPMSSFAADVCFMKVCEELMICLLSFADTIITTGSYLPNLLFNIIPQMSKSLHELDRVLESAYKKDFMWLEAYTKMVQKRFDILKKFANVVYRDSDTQATVASGGLHPFTLQVMNYIHSILPPLRGSVQGYRMIPGREGKKSSFSQLLARMIELLESNLEAKSRDYTDPALAYLFMMNNLRHIGQEVYTWSGTTIFDYYWFGQHATKVEHNLKLFQRHSWDKMLDFLKLEQYESVAPNVVAESMKDKPNLFFQNFEEICKVQSTWIVSDTQLRKRIIKSIYSVLLPAYGEFTNRFRDVFGKHADEYIEYGIVQIENGLSHLFLVRDPMLEYV 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1889 695 Gene3D Exocyst complex component Exo70 219 689 - -
Aed3g1889 695 SUPERFAMILY Cullin repeat-like 275 685 IPR016159 -
Aed3g1889 695 PANTHER PROTEIN, PUTATIVE-RELATED 112 686 - -
Aed3g1889 695 Pfam Exo70 exocyst complex subunit 339 682 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aed3g1889 695 PANTHER EXOCYST COMPLEX PROTEIN EXO70 112 686 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1889 Aed-Chr3 23221928 23224085 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1889 265 685 EXO70 exocyst subunit family AT5G58430 38.826 4.90e-83 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1889 - - gsj:114384171 533.102