Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1883 ATGAGATGCAGTTCTTCAGTGCAGCTTAGAAGCCCGAAGAAAGAAGAACAAGAGGTGCCAGATGCCATCATCTCCAGCTATCATGACGAAGAGTTCAATATTTATGAGGAACTGAAAGGGGTTTTGAATAGTACTACCAAGGTGGAAGAAGAAGAAGAACAAGAACAAGACTCGTTGCCACAACAAAACTCTTCCAGTGGTGAGTACTTCCATTGGGACTTCATGGAATGGGAGGAAGAGTTTCGTGCCCCCAATGTTGGAGATGAAGAAGATATCATAATAAAGAGAGAAACCAACTTTTTCGGGTTTTGGGATCTTGATGGTGAGAAGATGCTTTCTTTGAACTTGAATTTGAACTATCAAGATGTTTTGGATGCATGGTCTGACCGTGGCTCTCTTTGGGCTGATGATTGTTCTCTTTCATTCTCCACCAATGATACCTACTATATGGGAGAAGTGCCGGTGTTGGAAGAAGAGAGAGCCAGAAGAGAAGCAAGTGTTCTTAGGTACAAAGAGAAGCGGCAGAACCGGTTGTTCTCAAAGAAGATAAGATACCAAGTTCGGAAATTAAACGCTGATAAAAGACCAAGAATCAAGGGTCGCTTTGTGAAGAGACAGTACTGA 624 0.4247 MRCSSSVQLRSPKKEEQEVPDAIISSYHDEEFNIYEELKGVLNSTTKVEEEEEQEQDSLPQQNSSSGEYFHWDFMEWEEEFRAPNVGDEEDIIIKRETNFFGFWDLDGEKMLSLNLNLNYQDVLDAWSDRGSLWADDCSLSFSTNDTYYMGEVPVLEEERARREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKRQY 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1883 207 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 6 206 - -
Aed3g1883 207 Pfam CCT motif 163 205 IPR010402 GO:0005515
Aed3g1883 207 PANTHER CCT MOTIF FAMILY PROTEIN 6 206 - -
Aed3g1883 207 MobiDBLite consensus disorder prediction 1 21 - -
Aed3g1883 207 MobiDBLite consensus disorder prediction 44 66 - -
Aed3g1883 207 ProSiteProfiles CCT domain profile. 163 205 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1883 Aed-Chr3 23193870 23196020 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1883 107 205 C2C2-CO-like Transcription Factor Family AT1G73870 46.610 7.51e-22 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed3g1883 CCT 2.7e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1883 - - gmx:100801038 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1883 3 23193870 23196020 Aed3g1883 3 23193870 23196020 ECH