Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1880 ATGGAGAAGGTGGTGTGTGTGACCGGCGGCAGCGGCTGCATTGGTTCATGCCTCGTCCATCTCCTCTTGGATCGCGGCTACACCGTTCACGCCACCGTTCAAAATCTCAACGATGACGCCGAGACCAAGCATCTACAATCCCTCGACGGAGCCTCCACGCGCCTCCGCCTCTTCCAGATGGATCTCCTCCGCCACGACTCCGTACTCGCCGCCGTGCAAGGCTGCGCTGGCGTCTTCCACCTCGCCTCTCCCTGCATTGTCGACCAAGTCCACGACCCCCAGAAGGAGCTTCTGGACCCGGCAGTTAAGGGAACCATGAACGTGCTCACGGCCGCGAAGGAAGCAGGGGTGAGGCGCGTGGTGCTCACGTCCTCCATCTCCGCGATTACGCCGAGCCCCAACTGGCCCGGTGATGTTGCCAAGACAGAGGAGTGCTGGACTGATGTTGAATATTGCAAACAAAAGGGGTTGTGGTATCCATTGTCGAAGACTTTGGCTGAGAAAGCTGCTTGGGATTTTGCTAAAGAGAATGGTTTGGATGTTGTGGTGGTGAATCCTGGCACTGTGATGGGTCCTGTTATTCCACCAAGGCTTAATGCGAGCATGATCATGCTCGTGCGCCTTCTACAAGGCTGTGCTGAAACATATGAGGACTTTTTTATGGGATCGGTCCACTTTAAGGATGTAGCATTGGCACATATTTTGGTGTATGAGAACAAATCAGCAGCTGGGAGGCATATGTGTGTTGAAGCTATCTCTCACTATGGTGACTTTGTGGCAAAAGTTACTGAACTTTATCCAGAGTATAACGTGCCTAAGATGCAACGAGATACGCAACCAGGATTATTGAGAACAAAGGATGGAGCAAAGAAACTTGTGGATTTGGGTTTGCAATTCATTCCAATGGAGAAGATTATTAAGGATGCTGTAGAGGATTTGAAGAGCAAAGGGTTCCTTTCTTAA 963 0.514 MEKVVCVTGGSGCIGSCLVHLLLDRGYTVHATVQNLNDDAETKHLQSLDGASTRLRLFQMDLLRHDSVLAAVQGCAGVFHLASPCIVDQVHDPQKELLDPAVKGTMNVLTAAKEAGVRRVVLTSSISAITPSPNWPGDVAKTEECWTDVEYCKQKGLWYPLSKTLAEKAAWDFAKENGLDVVVVNPGTVMGPVIPPRLNASMIMLVRLLQGCAETYEDFFMGSVHFKDVALAHILVYENKSAAGRHMCVEAISHYGDFVAKVTELYPEYNVPKMQRDTQPGLLRTKDGAKKLVDLGLQFIPMEKIIKDAVEDLKSKGFLS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1880 320 Pfam NAD dependent epimerase/dehydratase family 5 241 IPR001509 -
Aed3g1880 320 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 311 - -
Aed3g1880 320 CDD FR_SDR_e 5 297 - -
Aed3g1880 320 Gene3D - 1 320 - -
Aed3g1880 320 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 3 311 - -
Aed3g1880 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 313 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1880 Aed-Chr3 23178780 23181431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1880 3 320 Monolignol Biosynthesis Gene Families AT5G58490 77.673 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1880 - - gmx:100803241 632.869