Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1869 ATGGCACCATTCAATTTCGCTCCGTTGAAGTTGCTCTTATCTCTGTTTTTGGCGTTGAGCCAGAAACAGAGTGTCTGTTCCACCACGCTCAAGAGCGAAGAAGGTTTGGCGCTTCTGGCGTTGAGGGAGAGAGTGGTGAGTGACCCGCTGGGGGCTTTATCAAGTTGGAGTAGTGCCGAAGATGATCATTGCTCCTCGTGGTTCGGTGTAGAGTGTTTTCACGGTTATGTTGTGACCTTGAATTTAAAAGACCTTTGTCTTGAAGGAACACTAGCACCAGAAATTGGAAACCTGGCTCACATAAAATCAATCATTTTGCGCAACAACTCCTTCTTTGGAGAAATTCCCAAAGAGATTCTCCACTTGGAAAAGCTGCAAGTCCTTGACTTGGGACATAACAACTTTAGTGGATCACTTCCATTTCACCATGGCAATATGCCATCCCTGACCACTCTTTTATTGGACAACAATTACTTTCTTACCAACTTAACTCCAGAGCTGTATGAGCTTAAAATTATGAATTCTGAAATTCATGCCAATGAAGAACAACCTACTAGAGAAGCATTTGTTGGCAGATGTGGTTTATGGCACATTAGCCAACATGGGGAAAGATCATACAGAAGGCAACTTCTCACGGTAGCAAATGCTGCTAACCGAGGGACACTTAAACAATCAGCAGCATCACATTTTCCATTTTCATTACCACCAAATTTTGAGCCTTTCTCATCATCACCATCAGAAAGTCCTTCATATTCACCAGAATCAGCTCCATCATCATATTCGCCATCGCCCTCCAGTATTTTTTTCCCTCCTTCACCCTCTCCAGACATATCACCCCCAGCAAACACACCCGTGTCTACACCACCCGAGTTTAATTGGGTTTCAGCACCTAGCCCTTCACCATTTTCTAACCAAGGGAACACAAACAGTTCCAATCAAATACATCATTCAACGATAATCTGGTCTGCAGTTGGGGGCTTCTCCTTATTGATTTTGGTGTCAGCCATTGTTTTTGCTTGCTTCCGAAGCAGGAAGGTTACGGCTGTTAAACCTTGGTCCACTGGGTTGAGTGGCCAGCTGCAGAAAGCTTTTGTAAAAGGTGTGCCAAGTCTCAGACGAGGAGAAATTGAAGCAGCTTCTGAATATTTCAGCAACATTATTGGTTCTCTTCCTGATGGAACTGTGTATAAGGGGACTCTGTCCAGTGGAGTTGAGATAGCTGTAGCATCCTCGGCAGTGGCCACAGCTCAAAACTGGTCAAAAAGTATGGAAGCTCTATTCCGAAAGAAGATTGCGACATTATCTAGAGTGAACCACAAGAATTTTGTGAATCTTATTGGGTATTGTGAAGAGAATAAACCATTCTCAAGAATGATGGTGTTTGAGTACGCTCCAAATGGAACACTCTTTGAGCATCTACACATTAGAGAAGCAGAAGAACTAAATTGGACAATGAGAATGAGGATAGCTATGGGAATAGCCTACTGCCTAGAGTATATGCATGAGATGAAACCTCCCATTGCCCATAGAAACCTGCAATCTTCCTTTGTATACCTTACTGAAGATTATGCTGCTAAAATATCAGATCTTAGTTTATGGAATGACATGTGTGCTACAAAGAATGGTTCTGCAAGCACACAACTCTTGGAAACATCTTCAGCAGATACCAAGGACAATGTTTACAGCTTTGGAATAATATTGTTTGAGTTGATTACAGGGAGAATTCCCCTTGCTGGGAACAGTGAACTTCTGGCAGATTGGGCAGCAGAATATGTAAGGTGGGGGAAGTCCTTAAGAGATATTGTGGATCCAAGATTGAACTCTTTGCAGAAAGAGGAGATTGAGGAATGGTGTGAAGCGATAAGAAATTGTGTACAACCAGATCCAGAGAAAAGGCCAACTATGAAAGAAGTTACATCTAAACTCAAGGAAATCACAGCCATGGGACCTGATGGAGCAAATCCAAAAGCATCACCACTTTGGTGGGCAGAAATGGCAATTACCTCCACTGATTCAAGTTGA 2022 0.4283 MAPFNFAPLKLLLSLFLALSQKQSVCSTTLKSEEGLALLALRERVVSDPLGALSSWSSAEDDHCSSWFGVECFHGYVVTLNLKDLCLEGTLAPEIGNLAHIKSIILRNNSFFGEIPKEILHLEKLQVLDLGHNNFSGSLPFHHGNMPSLTTLLLDNNYFLTNLTPELYELKIMNSEIHANEEQPTREAFVGRCGLWHISQHGERSYRRQLLTVANAANRGTLKQSAASHFPFSLPPNFEPFSSSPSESPSYSPESAPSSYSPSPSSIFFPPSPSPDISPPANTPVSTPPEFNWVSAPSPSPFSNQGNTNSSNQIHHSTIIWSAVGGFSLLILVSAIVFACFRSRKVTAVKPWSTGLSGQLQKAFVKGVPSLRRGEIEAASEYFSNIIGSLPDGTVYKGTLSSGVEIAVASSAVATAQNWSKSMEALFRKKIATLSRVNHKNFVNLIGYCEENKPFSRMMVFEYAPNGTLFEHLHIREAEELNWTMRMRIAMGIAYCLEYMHEMKPPIAHRNLQSSFVYLTEDYAAKISDLSLWNDMCATKNGSASTQLLETSSADTKDNVYSFGIILFELITGRIPLAGNSELLADWAAEYVRWGKSLRDIVDPRLNSLQKEEIEEWCEAIRNCVQPDPEKRPTMKEVTSKLKEITAMGPDGANPKASPLWWAEMAITSTDSS 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1869 673 Gene3D Phosphorylase Kinase; domain 1 347 463 - -
Aed3g1869 673 MobiDBLite consensus disorder prediction 271 286 - -
Aed3g1869 673 Pfam Protein tyrosine and serine/threonine kinase 386 642 IPR001245 GO:0004672|GO:0006468
Aed3g1869 673 PANTHER PROTEIN MALE DISCOVERER 2 12 672 - -
Aed3g1869 673 SUPERFAMILY L domain-like 40 170 - -
Aed3g1869 673 Gene3D Ribonuclease Inhibitor 31 181 IPR032675 -
Aed3g1869 673 MobiDBLite consensus disorder prediction 271 290 - -
Aed3g1869 673 Pfam Leucine rich repeat 100 158 IPR001611 GO:0005515
Aed3g1869 673 Gene3D Transferase(Phosphotransferase) domain 1 464 652 - -
Aed3g1869 673 SUPERFAMILY Protein kinase-like (PK-like) 379 642 IPR011009 -
Aed3g1869 673 MobiDBLite consensus disorder prediction 241 263 - -
Aed3g1869 673 MobiDBLite consensus disorder prediction 241 265 - -
Aed3g1869 673 ProSiteProfiles Protein kinase domain profile. 381 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1869 673 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Aed3g1869 673 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 12 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1869 Aed-Chr3 23085252 23090435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1869 13 649 Receptor kinase-like Gene Family AT2G01210 25.811 1.76e-46 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Aed3g1869 PK_Tyr_Ser-Thr 3.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1869 - - gmx:100779427 1058.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1869 3 23085252 23090435 Aed3g1869 3 23085252 23090435 ECH
Aed3g1869 3 23085252 23090435 Aed4g2223 4 24903960 24907228 ECH
Aed4g2223 4 24903960 24907228 Aed3g1869 3 23085252 23090435 PCT