Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1863 ATGGCCTCGGTGTGCGTGACGGACGCTGCCCGCGCGGCGGCGTGTAGGGACGGCGCGGCGGCGGGTCACCTGAAAGTGATATCGATGTTCGTAATCTTCGTGACGAGCGTGGCCGGGATGTCGTCGCCGGTGGTCCTCGCCGGAGTCTTCCGCGGGAAGCCGCTCTACGACAAGGCGATAGTCGTGATAAAGTGCTTCGCGGCGGGGGTGATACTCTCGACCTCGCTCGTCCACGTGCTCCCGGACGCGTACGCGGCACTCGCCGACTGCCACGTGGCTTCTAAACACCCGTGGAAGGACTTCCCCTTCGCGGGACTCGTGACGCTGGTCGGCGTGCTGCTGGCGCTGGTCGTGGACCTCGCGGCGAGCTCGCACGTGGAGCAGCACGCGCACGGGCAGTACGCGCCGGTGGAGAAGGAGGCCGCCGTGGAGCTCGGCGGCGGCGGCGGCGAGGGAGAGAGAGGTGAAGAATTGGTGAAATTGAAACAGAGGTTGGTCTCGCAGGTGCTGGAGATTGGGATAATATTTCACTCTGTGATAATTGGGGTTACTATGGGAATGTCGCAAAACGTTTGCACTATTCGGCCTCTCGTTGCTGCTTTGGCTTTTCATCAGATATTTGAAGGCATGGGTCTTGGTGGCTGCGTCGCTCAGGCAGGATTTAGCTTAGGAACAATTGCATACATGTGCTTCATGTTCGCAGTGACAACACCAATGGGAATAATGTTGGGGATGGCATTATTCTCACTTACAGGTTATGACGATAGTAACCCTAATGCCTTAATCTTGGAAGGGTTATTGGGTTCGATTTCATCGGGGATACTAATTTACATGGCCCTTGTTGACCTCATAGCAGTTGACTTTTTTCACAACAAGCTTATGAACTCCAATCCATGGTTGAAGAAAGCATCTTTTGTTGCCTTAACCCTTGGTTCTGCTGCAATGTCTATTCTCGCCCTATGGGCTTGA 969 0.5552 MASVCVTDAARAAACRDGAAAGHLKVISMFVIFVTSVAGMSSPVVLAGVFRGKPLYDKAIVVIKCFAAGVILSTSLVHVLPDAYAALADCHVASKHPWKDFPFAGLVTLVGVLLALVVDLAASSHVEQHAHGQYAPVEKEAAVELGGGGGEGERGEELVKLKQRLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVAALAFHQIFEGMGLGGCVAQAGFSLGTIAYMCFMFAVTTPMGIMLGMALFSLTGYDDSNPNALILEGLLGSISSGILIYMALVDLIAVDFFHNKLMNSNPWLKKASFVALTLGSAAMSILALWA 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1863 322 Pfam ZIP Zinc transporter 155 319 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Aed3g1863 322 Pfam ZIP Zinc transporter 24 141 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Aed3g1863 322 PANTHER ZINC TRANSPORTER 6, CHLOROPLASTIC 4 322 - -
Aed3g1863 322 TIGRFAM zip: ZIP zinc/iron transport family 11 322 IPR004698 GO:0005385|GO:0016021|GO:0071577
Aed3g1863 322 PANTHER ZINC/IRON TRANSPORTER 4 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1863 Aed-Chr3 23052942 23056542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1863 1 322 Inorganic Solute Cotransporters AT2G30080 67.544 5.36e-158 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1863 K14709 - gmx:100797310 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1863 3 23052942 23056542 Aed3g1863 3 23052942 23056542 ECH
Aed3g1863 3 23052942 23056542 Aed4g2235 4 25003185 25005344 ECH
Aed4g2235 4 25003185 25005344 Aed3g1863 3 23052942 23056542 PCT