Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1855 ATGGTTTCGTCAGTTTCGTGGGTGAGAGGCAAGTGCGTCGGTAAGGGCGCGTTTGGGGTTGTCAACGTGGCGGTTTCGAAAACCGATGGTTGCGTTTTCGCTGTGAAGTCCGTGGATTTTAAAACGGGGCTTTCTGGTCATCAGGTGGAGGCGTTGGAGAACGAGATTAGGATTCTGAAACGCGTGGCTTCGCCGCACGTGGTGGATTATCTCGGCGACGATGTCACGTGCGAGGGTGGAACGGCGTCGTTCAGGAACCTTCATTTGGAGTACATGCCAGGTGGCACCGTCGCTGACTTGGACCGCGCTGACGTGGACGAGCGGTTAGTGAGGCGCTACGCGTGGTGCCTTGTGAGCGCGCTGCGTGACGTTCACACGCAGGGGTTCGTGCACTGCGACGTGAAGGGAAGGAACGTGCTTCTCTCCGGCGACGGCGCAATCGCGAAGCTCGCGGACTTCGGCGCGGCGGTGGAATTCGAATCCTCGCCGGAGGAGTTGCTGTTGCCGCGGGGGAGTCCGATGTGGATGGCGCCGGAGGTGGTTCGCCGGGAGCGGCAGGGGCCGGAGTCCGACGTGTGGTCGCTCGGATGCACGGTGATCGAGATTGTCACCGGGAAACCGGCGTGGGAGGATCGCGGCGTCGACACGCTGAGTCGAATCGGTTACTCGGACGAGTTGCCGGAGTGTCCGAGCGAGTTATCGGAGCTTGGCAAAGATTTTCTCGAGAAGTGTCTCAGAAGAGAACCGAGAGAGCGGTGGAGCTGCGATCAGCTGCTGCAGCACCCATTTTTGCTTCCCTACTACACCGTAGTTGAATCGTCGCCTCGGTGCGTTCTCGACTGGGTTGACTCGGAGTTCGCCGAGTCAGACAACGAACGTGATCAAGAAGAGATGTTTTTAAAATTTAACAACGCAGAAGAAAATTCAAATTCAGTTATTAAAAATAGAATTAGTAAATTAGCGACAGAGTCGAGGGTAAATTGGGAAACAGAGAGTTGGGTAGTAGTGAGGGAAATTGAAATTGAGTCCAACGGAGAACCAACGACAATGGGAACAGAAGAAGAAGGAGCGTGTGATGATGGTGTTGCTTCCAACAAAGAAGGGGTAAATTGGGAATTTAGTTCGGAATATTCGAATTCTGAAGGGGTAAATCGGGAAATAGTAAAGTTTGGTGGGAGTAAGAGTAACACCGCTGGAGGGGGTGGTGGTTGGAGCTGTCGTTGGACACATGATGCCTCTCTTTACTTTTCTGTCAAGGATATGGGAGATCTTAGCTGGGATGGGAATTTAAGATAA 1296 0.537 MVSSVSWVRGKCVGKGAFGVVNVAVSKTDGCVFAVKSVDFKTGLSGHQVEALENEIRILKRVASPHVVDYLGDDVTCEGGTASFRNLHLEYMPGGTVADLDRADVDERLVRRYAWCLVSALRDVHTQGFVHCDVKGRNVLLSGDGAIAKLADFGAAVEFESSPEELLLPRGSPMWMAPEVVRRERQGPESDVWSLGCTVIEIVTGKPAWEDRGVDTLSRIGYSDELPECPSELSELGKDFLEKCLRREPRERWSCDQLLQHPFLLPYYTVVESSPRCVLDWVDSEFAESDNERDQEEMFLKFNNAEENSNSVIKNRISKLATESRVNWETESWVVVREIEIESNGEPTTMGTEEEGACDDGVASNKEGVNWEFSSEYSNSEGVNREIVKFGGSKSNTAGGGGGWSCRWTHDASLYFSVKDMGDLSWDGNLR 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1855 431 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 14 3 363 - -
Aed3g1855 431 SMART serkin_6 7 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1855 431 CDD STKc_MAPKKK 6 264 - -
Aed3g1855 431 SUPERFAMILY Protein kinase-like (PK-like) 7 290 IPR011009 -
Aed3g1855 431 Pfam Protein kinase domain 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1855 431 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 363 - -
Aed3g1855 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Aed3g1855 431 ProSiteProfiles Protein kinase domain profile. 7 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1855 431 Gene3D Transferase(Phosphotransferase) domain 1 6 340 - -
Aed3g1855 431 ProSitePatterns Protein kinases ATP-binding region signature. 13 36 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1855 Aed-Chr3 22977076 22978660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1855 1 402 MAP Kinase Kinase Kinase AT1G07150 51.220 1.03e-126 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aed3g1855 Pkinase 1.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1855 - - gmx:100807131 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1855 3 22977076 22978660 Aed3g1855 3 22977076 22978660 ECH
Aed4g2241 4 25045370 25048343 Aed3g1855 3 22977076 22978660 PCT