Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1843 ATGCACATGAACTCCTACTCTGAAGCCACGACATCATCACAACAAGCAATGGAGGAAGATTTGGAGAACAACAACAGTAGTGAGGTTTGCAACAATAATGCAATGACACCAATGGTGAGAAAGAAGTCAGAAGTAGCTGTGGTGTTGACAAATAGTAACTCTCGTTTCCAAATGCTAAGGAATTTCATGACCAATTTGCAAGAGGTTGTCTTCGGCACTAAGCTTGTGGTGCTTTTTCCGGCGCCTTGGATTTTTGCTTTCAGCCTGCTTGGACTTGCTCCACTTGCTGAACGTGTCAGCTTCCTCACTGAGCAAATTGCATATTTCACCGGTCCAACAGTTGGAGGGCTTTTGAATGCAACATGTGGAAATGCAACCGAGATGATCATAGCATTATTAGCACTTCACCAGAACAAAGTACATGTTGTGAAGTTGTCCCTTCTAGGTTCCATTCTCTCAAACCTTCTCTTGGTTCTTGGCAGTTCACTCCTCTGTGGTGGAGGGGGCGATCATTCTATAGCCACAAGCACTCTTCAGTTGTCCAGAGCAAGCAGCATTGTTATGCTTCTAGCATACGTTGCTTATATCTTCTTCCAATTAAAAACCCATCGTAAATTGTTTGATGCACAAGAGGCAGTGATAGGATTTTGGAGTGCATTTACCTGGTTGGTGGGTATGACATTAGTCATATCTGTACTTTCTGAATATGTTGTGGGAACCATTGAGGCTGCTTCAGATTCTTGGGGCATTTCTGTAAGCTTCATTAGCATAATTTTGCTGCCAATTGTTGGAAATGCCGCAGAACATGCTGGTTCAATCATATTTGCTTACAAGAACAAGTTGGACATATCTTTGGGTGTTGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTTCCATTAAGTGTAGTTGTTGCATGGATAATGGGAATAAAAATGGATTTGGATTTCAGTCTTCTTGAAACTGGATGTCTTGCTTTTACAATTATAATTACAGCTTTCACTTTACAGGATGGAACTTCACACTACATGAAAGGAGTGGTTCTTACTCTCTGTTACTTTGTCATTGGTGCATGTTTTTTTGTTCTCAAAACTCCTCTAATCGGGCAATCTCCTAACTCCAATTTTGGAGCTAAACCATCCTTTGAAGCCATCATCACTTGA 1167 0.4122 MHMNSYSEATTSSQQAMEEDLENNNSSEVCNNNAMTPMVRKKSEVAVVLTNSNSRFQMLRNFMTNLQEVVFGTKLVVLFPAPWIFAFSLLGLAPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATEMIIALLALHQNKVHVVKLSLLGSILSNLLLVLGSSLLCGGGGDHSIATSTLQLSRASSIVMLLAYVAYIFFQLKTHRKLFDAQEAVIGFWSAFTWLVGMTLVISVLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAYKNKLDISLGVAMGSATQISMFVVPLSVVVAWIMGIKMDLDFSLLETGCLAFTIIITAFTLQDGTSHYMKGVVLTLCYFVIGACFFVLKTPLIGQSPNSNFGAKPSFEAIIT 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1843 388 Pfam Sodium/calcium exchanger protein 219 357 IPR004837 GO:0016021|GO:0055085
Aed3g1843 388 Pfam Sodium/calcium exchanger protein 82 167 IPR004837 GO:0016021|GO:0055085
Aed3g1843 388 PANTHER VACUOLAR CATION/PROTON EXCHANGER 16 167 - -
Aed3g1843 388 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 170 372 IPR004713 GO:0006812|GO:0008324|GO:0016021
Aed3g1843 388 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 16 167 IPR004713 GO:0006812|GO:0008324|GO:0016021
Aed3g1843 388 PANTHER VACUOLAR CATION/PROTON EXCHANGER 170 372 - -
Aed3g1843 388 MobiDBLite consensus disorder prediction 1 31 - -
Aed3g1843 388 Gene3D - 112 362 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1843 Aed-Chr3 22821642 22825593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1843 32 367 Antiporters AT2G38170 59.753 4.03e-158 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1843 K07300 - gmx:100802344 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1843 3 22821642 22825593 Aed3g1843 3 22821642 22825593 ECH
Aed4g2261 4 25218663 25222193 Aed3g1843 3 22821642 22825593 PCT