Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1834 ATGATGATGCAATTGCAAATGGAATCCCTCCCTCTTTTCCTCACTCTAATAGCAACCCTCTCAGCCTACCTCCTATGGTTCCACCTCCTTGCCCGAACCCTAACTGGGCCTTGGCCCTGGCCCTTCGTGGGGAGTCTCCCGGGCCTCTTCAGGAACCAGGATCGCGTGCACGACTGGATCGCAGAGAACCTCCGCAGCATGGGAGGCTCCGCGACGTACCAGACGTGCATAATCCCGATCCCTTTCTTGGCGCGCAAGGAAGGGTTTTACACGGTCACGTGCCATCCCAAAAACCTGGAGCACATCCTGAAGACGCGCTTCGACAACTACCCGAAGGGCCCCAAGTGGCAGACGGCGTTCCACGACCTCTTGGGCCAGGGCATCTTCAACAGCGACGGTGACACGTGGCTCATGCAGCGCAAAACCGCGGCGTTAGAGTTCACCACGCGAACGTTGAAACAAGCCATGTCTCGCTGGGTTAACCGATCCATTAAGAACCGGTTGTGGTGTATATTAGACAAAGCGGCGAAGGATAGCGTCTCGGTTGACTTGCAAGACCTTCTTCTGCGTTTGACCTTTGATAATATCTGTGGACTCACCTTCGGCAAAGACCCCGAAACTCTATCACCGGAGCTTCCCGAAAACACGTTCGCCGTTGCTTTTGACACTGCCACTGAAGCCACCATGCACAGGTTCCTCTACCCGGGTCTGGTATGGAGGTTCCAGAAGCTTCTGTGCATTGGATCCGAGAAGAGGTTAAAGGAGAGTCTCCGAATTGTGGAAACCTACATGAACGACGCCGTCGCGGATCGCAAGGAAGCTCCCTCCGACGACTTGCTCTCGCGTTTCATGAAGAAGCGCGACGCCGCCGGAACTGCCTTCTCCGCCGCGGTGCTCCAGCGCATCATCCTCAACTTCATCCTCGCCGGCAGGGACACCTCATCGGTGGCCCTCACCTGGTTCTTCTGGCTCCTCACGAATCACCCCATCGTGGAGCAAAAAATCGTGACCGAGATCACAACCGTCCTCGCCGACACGCGCGGCGGAGACCGCCGCCTCTGGGCGGAGGACCCTCTCGACTTCGGCGAGGCCGATCGGCTTGTGTACCTGAAGGCCGCGCTTGCCGAAACGCTGCGTTTATACCCGTCCGTTCCGCAGGACTTCAAGCAGGCCGTCGCCGACGACGTGTTGCCGGACGGCACGAAGGTTCCGGCGGGGTCGACGGTGACGTACTCGATATACTCCGCGGGGAGAGTGGAAACGATATGGGGAAAAGATTGCATGGAGTTTAAACCGGAGCGGTGGCTTTCGGTTCGCGGGGACCGGTTCGAACCGCCGAAAGATGGGTTCAAGTTCGTGGCTTTTAACGCTGGACCGAGAACCTGCTTGGGCAAGGACTTGGCTTACCTACAAATGAAATCAGTGGCTGCCGCTGTGCTCCTTCGTTACCGGCTATCTCTGGTTCCCGGTCACCGGGTGGAGCAGAAGATGTCTCTCACCTTGTTCATGAAGAATGGGCTCAGGGTGTTGTTGCATCCACGTAAGCTTGAAAGTGGGCCAGGGGATGCCACCTCACCTTGA 1581 0.5743 MMMQLQMESLPLFLTLIATLSAYLLWFHLLARTLTGPWPWPFVGSLPGLFRNQDRVHDWIAENLRSMGGSATYQTCIIPIPFLARKEGFYTVTCHPKNLEHILKTRFDNYPKGPKWQTAFHDLLGQGIFNSDGDTWLMQRKTAALEFTTRTLKQAMSRWVNRSIKNRLWCILDKAAKDSVSVDLQDLLLRLTFDNICGLTFGKDPETLSPELPENTFAVAFDTATEATMHRFLYPGLVWRFQKLLCIGSEKRLKESLRIVETYMNDAVADRKEAPSDDLLSRFMKKRDAAGTAFSAAVLQRIILNFILAGRDTSSVALTWFFWLLTNHPIVEQKIVTEITTVLADTRGGDRRLWAEDPLDFGEADRLVYLKAALAETLRLYPSVPQDFKQAVADDVLPDGTKVPAGSTVTYSIYSAGRVETIWGKDCMEFKPERWLSVRGDRFEPPKDGFKFVAFNAGPRTCLGKDLAYLQMKSVAAAVLLRYRLSLVPGHRVEQKMSLTLFMKNGLRVLLHPRKLESGPGDATSP 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1834 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Aed3g1834 526 Gene3D Cytochrome P450 30 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1834 526 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1834 526 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1834 526 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1834 526 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1834 526 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1834 526 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1834 526 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1834 526 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1834 526 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1834 526 PANTHER CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE 8 516 - -
Aed3g1834 526 PANTHER CYTOCHROME P450 8 516 - -
Aed3g1834 526 Pfam Cytochrome P450 86 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g1834 526 SUPERFAMILY Cytochrome P450 28 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1834 Aed-Chr3 22776175 22777907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1834 7 514 Cytochrome P450 AT5G58860 73.725 0.0 782
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1834 K15401 - gmx:100788343 999.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1834 3 22776175 22777907 Aed3g1834 3 22776175 22777907 ECH
Aed4g2288 4 25420981 25423258 Aed3g1834 3 22776175 22777907 PCT