Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1821 ATGAAGAAAATACCACCCCAAAATTTGCATCAATCTAGCCAAAGAAAACAGATTGCTAAACTCCAACTTAATGATGCTGCAAAGAGGCACAGTTCTGCAGCACTGAGATCTTTCAAGGATGCTATCAAGAAATGTGCATCTGTTTTTTCAACCATGATCTATGGCAAAAGAAAATCAGCCTCCTATGTTGTTGGAAATGATGTCAGAAAGGACACATCCAAAATTAGAGGGGTGGTGTCATCATCAACTGATTTATCATCTGAGAGTACCACCAAGAACTCATCAAAATGGAAGTTTTCTTATTCCTATGCATCATCTAGCACTGCAAGTGGACAACTTGGAATTGGAAACTTCTCCTTTGAAGAAATTTACAAGTCAACTGCAAAATTCTCTCCAGCTAATGAAATTGGGCAAGGTGGCTTTGGAACAGTCTATAAGGGAAGGCTTAATGATGGATCCATTGTTGCCGTGAAGCGTGCCAAGAAGGAAGTGATACACAATCACTTACATGAGTTTAAGAATGAAATATACACCTTGTCCCAAATTGAGCATAGGAATCTTGTGAGGTTGTATGGATATTTGGAGCATGGAGATGAGAAGATTATTGTTGTTGAATATGCAATGAAGATGCTGAAACAAGGAGATTCTGTATTTGCCATGGACCCTAGGCTGAGAAGAAATCCACCCTCCATCAAGGCAGTGAAGAAGGTTCTGAAACTAGCTCTCCAATGCGTCGCGCCTTCGAAACAATCACGGCCGCCTATGAAGAATTGTGCAGAGGTTCTGTGGGACATCCGCAAAAGTTTTAGAGATGAAGCCAGTTCTGATCCGCCGCACCTTACTTCTCACCATTCTGCAAACTTTCCTCAAGGAGAAAAGAATAAGTTTGGTATTGAAGATGATGACAGCTATAAATTTGTCTCTGTGCCTAATCATATTCGTTCATAA 948 0.4051 MKKIPPQNLHQSSQRKQIAKLQLNDAAKRHSSAALRSFKDAIKKCASVFSTMIYGKRKSASYVVGNDVRKDTSKIRGVVSSSTDLSSESTTKNSSKWKFSYSYASSSTASGQLGIGNFSFEEIYKSTAKFSPANEIGQGGFGTVYKGRLNDGSIVAVKRAKKEVIHNHLHEFKNEIYTLSQIEHRNLVRLYGYLEHGDEKIIVVEYAMKMLKQGDSVFAMDPRLRRNPPSIKAVKKVLKLALQCVAPSKQSRPPMKNCAEVLWDIRKSFRDEASSDPPHLTSHHSANFPQGEKNKFGIEDDDSYKFVSVPNHIRS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1821 315 MobiDBLite consensus disorder prediction 273 299 - -
Aed3g1821 315 Gene3D Phosphorylase Kinase; domain 1 88 206 - -
Aed3g1821 315 ProSiteProfiles Protein kinase domain profile. 130 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1821 315 ProSitePatterns Protein kinases ATP-binding region signature. 136 162 IPR017441 GO:0005524
Aed3g1821 315 PANTHER OS01G0253100 PROTEIN 207 295 IPR045271 GO:0004714|GO:0006468
Aed3g1821 315 SUPERFAMILY Protein kinase-like (PK-like) 94 207 IPR011009 -
Aed3g1821 315 SMART tyrkin_6 130 262 IPR020635 GO:0004713|GO:0006468
Aed3g1821 315 PANTHER OS02G0821400 PROTEIN 1 206 - -
Aed3g1821 315 Pfam Protein kinase domain 133 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1821 315 PANTHER OS02G0821400 PROTEIN 207 295 - -
Aed3g1821 315 PANTHER OS01G0253100 PROTEIN 1 206 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1821 Aed-Chr3 22686939 22690771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1821 39 207 Receptor kinase-like Gene Family AT4G04540 33.333 7.53e-22 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Aed3g1821 Pkinase 1.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1821 - - gmx:100811511 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1821 3 22686939 22690771 Aed3g1821 3 22686939 22690771 ECH
Aed3g1821 3 22686939 22690771 Aed4g2564 4 27578544 27583908 PCT