Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1804 ATGAGGATGAACACTTTGGTGGAATGGTTCACTTCTTCTCAGGCTGTACTGAGCATGGTGCTGGTGCAACTCTTTGTAACTGGATTGCAGCTTCTGTCTAGGGTTATTTTGGTTCAAGGCACTTTCATTGGTGCACTTATTACTTATCGTCATATTGTTGCTGCTATTTGTGTTGCACCCTTTGCACTCTACTATGAAAGAGGCCGCGTAAAGAGCAAATTCACTTGGAAGGTTTGGTTTTGGCTCTTCATTAATGCATTAGTGGGGATGACCCTGGCTCAAGGATTGTTCTATTATGGTCTGCGAGACACTTCAGCTACTTATTCTGTCAATTTTCTCAACTTGGTTCCTATAACCACCTTCTTCACCTCTATCATATGCAGAATGGAGAGACTGAGGTTGCAAACAATGGGTGGTAAAGCAAAGTGTGTAGGGGCATTTTTATGTGTTGGAGGAGCATTACTTACGAGTCTTTACAAAGGGAAGGAGTTCTATCTTGGTAATCACAGTCATCAAGCTCAAACTGCTACTGCAGCACACAAAACCAACACGCTTCGTGGCACTTTGTTTTTGATTTGCAGCTGCTTCTCTTACACCACCTGGTTTATTTCCCAAGTGAAGTTGCTGCAAGTATTTCCATTGAAGTATTGGGGGACAATGATAGCATGCGTTCTGACATCAATTCAGGCAGCAATAATAGGTGGAGCATTGGCTACTGCTGCTACATTCTGCTTACTATCTTGGACAATTAAAGTGAAAGGACCAAGTTATCCTCCAATGTTCAATCCACTTGCTCTTATTTTTGTGGCCATATCAGAAGCTATAATACTTGGAGAACCATTAACTGTTGGTGGGCATGGTTTTGATCATAATGGGATTGTACTTCTTTTTGTGGGGGAAAAAGAATGA 909 0.418 MRMNTLVEWFTSSQAVLSMVLVQLFVTGLQLLSRVILVQGTFIGALITYRHIVAAICVAPFALYYERGRVKSKFTWKVWFWLFINALVGMTLAQGLFYYGLRDTSATYSVNFLNLVPITTFFTSIICRMERLRLQTMGGKAKCVGAFLCVGGALLTSLYKGKEFYLGNHSHQAQTATAAHKTNTLRGTLFLICSCFSYTTWFISQVKLLQVFPLKYWGTMIACVLTSIQAAIIGGALATAATFCLLSWTIKVKGPSYPPMFNPLALIFVAISEAIILGEPLTVGGHGFDHNGIVLLFVGEKE 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1804 302 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 159 - -
Aed3g1804 302 PANTHER WAT1-RELATED PROTEIN 13 234 IPR030184 GO:0016021|GO:0022857
Aed3g1804 302 PANTHER WAT1-RELATED PROTEIN 235 284 IPR030184 GO:0016021|GO:0022857
Aed3g1804 302 Pfam EamA-like transporter family 16 156 IPR000620 GO:0016020|GO:0016021
Aed3g1804 302 PANTHER WAT1-RELATED PROTEIN 13 234 - -
Aed3g1804 302 PANTHER WAT1-RELATED PROTEIN 235 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1804 Aed-Chr3 22548389 22553648 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1804 17 284 Nodulin-like Gene Family AT1G09380 30.769 2.51e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1804 - - gmx:100782551 471.855