Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1803 ATGACTCTATCTCAAGGACTATTCTACTATGGTCTCAGAGACACTTCAGCTACTTACTCTGTCAACACTCTCAACTTGGTCCCTATATGCACCTTCTTTGCCTCAATCATATTCAGATTGGAGAGATTGGGAGTGCACACTTGGGCTGGTAGAGCTAAGTGTGGAGGGACAATTTTGTGTGTTGGGGGAGCATTAGCTTCTAGTCTTTACAAAGGGAAGGAATTTTATCTTGGTCATCATTGTCATCATGCTCAAACGGCTGTTGCGGCACAAGCTATCATACTTGGAAAATCATTAACTGTTGGAACGTTGGTGGGCATGGTTTTGATAATGTTGGGATTGTACTTGTTTTTGTGGGGGAAAACTAAGGAGACAATGCGCAGCGCTGAACAGCCAATTGATGTAGCAGCTGCTGCAGAAGTATCAATATCAAACCTAGGGGCAGAATCAACGGCCACAGTAGTGCCAAGTTCTTCACCAATTAATGAACACTGTTGTAGTTCTTCAACTTTAAATTGA 519 0.4277 MTLSQGLFYYGLRDTSATYSVNTLNLVPICTFFASIIFRLERLGVHTWAGRAKCGGTILCVGGALASSLYKGKEFYLGHHCHHAQTAVAAQAIILGKSLTVGTLVGMVLIMLGLYLFLWGKTKETMRSAEQPIDVAAAAEVSISNLGAESTATVVPSSSPINEHCCSSSTLN 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1803 172 PANTHER WAT1-RELATED PROTEIN 89 141 IPR030184 GO:0016021|GO:0022857
Aed3g1803 172 PANTHER WAT1-RELATED PROTEIN 1 87 IPR030184 GO:0016021|GO:0022857
Aed3g1803 172 PANTHER WAT1-RELATED PROTEIN 89 141 - -
Aed3g1803 172 PANTHER WAT1-RELATED PROTEIN 1 87 - -
Aed3g1803 172 SUPERFAMILY Multidrug resistance efflux transporter EmrE 2 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1803 Aed-Chr3 22542447 22544087 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1803 2 86 Nodulin-like Gene Family AT3G30340 40.909 9.55e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1803 - - gmx:100792281 161.77