Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1800 ATGGCTTCCTTATTCAATATCTTGCTCATGTTTTGTTTGATTAATGTTCTGGCAGACCCAGTTGAAGTTCATTCAGCTGGTGAAGTTCCAATTAATGTGACAAAGCACTTCTCCTTCTATAACTTCAGCTTCAGCAACAACCCCAGACTAGTCCATGATGTGAAGCTCCTAGGAAGTGCCAAGTTCTCAAATGAAAAGGGTGCTCTTCAAATCCCAAATGAATCAGAAGACATAAGACACCAAGCAGGTAGAGGAATCTATTCCTTCCCAATTCGCCTGCTGGATCCAAGCACCAAGACTCCAGCTTCATTTCGAACCACTTTCTCATTCCAAATGAACAATTCCACTGCCTCTGAGCAAGCTGAATATGGAGGAAGTGGCCTCACTTTCATCATTGTCCCTGATGAGTTCACCGTGGGACGGCCGGGGCCGTGGCTTGGCATGCTCAATGATGCTTGTGAGATTGACTACAAGGCAGTGGCAGTGGAGTTTGACACAAGAAAGAACCCGGAGTTTGGAGATCCAAATGACAACCATGTTGGAATCAACTTAGGTACCATAGTGTCTGCTAAAGTTATCAATGTTTCTGATGTTGGTGTGTCCCTTAAGGATGGTTCTGTTCACCGTGCTTGGATCACCTATGATGGCCTTGAAAGGAGAATGGACATTCGTCTTGGAAGGGAAAACCAAGAGGATTATTCTTCAAAGCCTCTCTTTTCAGAAACTATAGATCTCTCTCCTTATCTAAATGAGTACATGTTTGTGGGGTTCTCAGCTTCCACAGGTAACCATACACAAATCCACAACATCCTCTCTTGGAACTTCACTTCCACAAGCCAAGCTTTTCTACGCTTGCCTTCATCTGAAGCCTGCCAGGGTAAGATCTTACTTGAGAATAGCACTGCTGCCACAGAACCACCAACTTCCAAAAAGTCTTCTAAGAATGAACCACCGCGAAGCTTTTTGATTTTTGTGGCTGCTGTGGCATTGGCTCTGGCTCTTTTCCTTGGCTTTTACTTCATCAGTAAGCACAGGAGAAATGCTTCCAAGTTAAACACTTCAGTGGAGTCAGATCTTCACATGCCAAGGCCTCCAAACAAGCCGCGCCGCTTCACTTTCTCTCAACTTTCATCTTCAACTCGGTCATTCAGTGAGATAGAGTTGCTTGGCAGTGATAATAGAGGAGAATACTACAGAGGAAAGCTTTCTAATGGCAGCCAGGTGGCTGTGAAGAGGTTCTCAGCTCAGTTTCTCAGCACACATGGATCGGAAAAGAAGCGTTTGTTGAAGGAAATCAAAGGCATTAGCCATGTTCGCCACCCAAATTTGCTTCTTGTAAGAGGGTGGTGTCAAGACAACCATGAAATCATGGTGGTCTATGACTTTGTCCCCAATGGCAGCCTAGACAAATGGCTATTTGGGGCCGGTGTTCTTCCGTGGACGCGGCGGTTCAAAGTTGTTAAGGATGTGGCTGATGGCTTGAGCTTCCTCCACACCAAGCAACTAGCCCACAAGAACTTGAAATGCAGCAGTGTGTTTCTAGATGTCAATTTCAGAGCTGTTTTGGGTGATTTTGGGTTTGTGTTGATGGGTGCAGAATCAAAAAACTTTGAGTCACAAGTGTGCCGAGGTGCTGATGTGTTTGAGTTTGGTGTCCTTGTGTTGGAAGTGATAGCTGGAAGGGTAAGGGATGAGAAAGAAGAGGAGGGAAATCCAGAAGAAAGGAACCTACTGGATTATGCTTGGAACTTGCATCAGATTGATGAAAAGGTGAAGCTGGTGGACAGAAGGATGGGATCATTGATCAACTTGGAGCAGGCAATTCGTGTTCTTGAAATCGGTTTGCTTTGCACTCTAAATGAGAACAAAGGAAGGCCCTCAATGGAACAAGTAGTGGAGTTTCTTCTCAACATGGATAAGCCTATTCCTGAGCTTCCAAGAACTCGCCCTATTGCCTTGTTCCCCTATAATAGTGCCAACACAGGACTTTGCAATGCATATTCTTGCACTTTTTAA 2016 0.4489 MASLFNILLMFCLINVLADPVEVHSAGEVPINVTKHFSFYNFSFSNNPRLVHDVKLLGSAKFSNEKGALQIPNESEDIRHQAGRGIYSFPIRLLDPSTKTPASFRTTFSFQMNNSTASEQAEYGGSGLTFIIVPDEFTVGRPGPWLGMLNDACEIDYKAVAVEFDTRKNPEFGDPNDNHVGINLGTIVSAKVINVSDVGVSLKDGSVHRAWITYDGLERRMDIRLGRENQEDYSSKPLFSETIDLSPYLNEYMFVGFSASTGNHTQIHNILSWNFTSTSQAFLRLPSSEACQGKILLENSTAATEPPTSKKSSKNEPPRSFLIFVAAVALALALFLGFYFISKHRRNASKLNTSVESDLHMPRPPNKPRRFTFSQLSSSTRSFSEIELLGSDNRGEYYRGKLSNGSQVAVKRFSAQFLSTHGSEKKRLLKEIKGISHVRHPNLLLVRGWCQDNHEIMVVYDFVPNGSLDKWLFGAGVLPWTRRFKVVKDVADGLSFLHTKQLAHKNLKCSSVFLDVNFRAVLGDFGFVLMGAESKNFESQVCRGADVFEFGVLVLEVIAGRVRDEKEEEGNPEERNLLDYAWNLHQIDEKVKLVDRRMGSLINLEQAIRVLEIGLLCTLNENKGRPSMEQVVEFLLNMDKPIPELPRTRPIALFPYNSANTGLCNAYSCTF 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1800 671 SUPERFAMILY Protein kinase-like (PK-like) 358 635 IPR011009 -
Aed3g1800 671 Pfam Protein tyrosine and serine/threonine kinase 387 529 IPR001245 GO:0004672|GO:0006468
Aed3g1800 671 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2-LIKE 24 653 - -
Aed3g1800 671 PANTHER - 24 653 - -
Aed3g1800 671 Pfam Legume lectin domain 36 281 IPR001220 GO:0030246
Aed3g1800 671 SUPERFAMILY Concanavalin A-like lectins/glucanases 38 279 IPR013320 -
Aed3g1800 671 ProSitePatterns Legume lectins beta-chain signature. 160 166 IPR019825 -
Aed3g1800 671 Gene3D Phosphorylase Kinase; domain 1 353 462 - -
Aed3g1800 671 ProSiteProfiles Protein kinase domain profile. 383 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1800 671 Gene3D - 34 285 - -
Aed3g1800 671 Gene3D Transferase(Phosphotransferase) domain 1 538 641 - -
Aed3g1800 671 Gene3D Transferase(Phosphotransferase) domain 1 463 537 - -
Aed3g1800 671 CDD lectin_legume_LecRK_Arcelin_ConA 36 278 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1800 Aed-Chr3 22525498 22527513 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1800 41 654 Receptor kinase-like Gene Family AT5G55830 32.110 1.31e-94 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed3g1800 Lectin_legB 2e-58 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1800 - - gmx:100781464 1238.79