Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1785 ATGAAGTTCCAACTCCATGCTGTTCCATTTGTTCTTCTAAGCTTCACAGTGTCTCTCTTTGGCCTGATTGAAGCTGACTTGAACTCTGACAAACAAGCTCTCCTTGAGTTCTTTTCCAATGTTCCACATGCTCCAAGGCTAAACTGGAGCCTAATCCCTTCCTCTAGCTCCCCTAAACTCATAGCATTGGATATTTCCTCTAACAACTTTTCTGGCAGTATTCCACATACCTTTCAGAATCTTACTAGACTCACTTGGTTGTATCTCCAAAACAATTCCATCTCTGGGGCTATCCCTCACTTCAACCTTCCAAGTCTCAAGTATTTGAATTTGAGCTATAACAATTTGAATGGCTCAATTCCAAATTCCATTAATAGCTTTCCATACACTTCTTTTGTTGGAAACTCTCACTTGTGTGGACCACCTCTCAATAACTGTTCAGAAGCCTCACCTCCATCTTCTTCTCCTTCCTCTCATTCTCCGGTTTATCAACCACTCTCTCCAGCAGCAACTCCCCAAAATAGAAGTGCTACTACCACTCCAAAGAGTTACTTTGGCCTGGCTACTATACTTGCTCTAGCAATTGGAGGCTGTGCCTTCATCTCTCTCCTAGTTTTGATCTTCTTTGTGTGTTGTTTGAAGAGGAACAAGAGTCAAAGCAATGGCATACTGACAGGAAAGGCACCTTGTGCTGGAAAGGCTGAGATTTCAAAGAGTTTCGGGAGTGGAGTGCAAGAGGCTGAAAAGAACAAGTTGTTCTTCTTTGAAGGTTGCTCTTATAGCTTTGACCTTGAAGACTTGTTGAAGGCTTCAGCTGAAGTTCTTGGAAAGGGAAGCTATGGAACAACATATAGGGCTGCTTTGGAGGATGGAACAACAGTGGTGGTTAAGAGGTTGAGAGAAGTACTAGTTGGAAAGAGAGAGTTTGAGCAGCAGATGGAGATTGTTGGAAGAATTGGAAGGCACCCCAATGTCATTCCCCTTCGAGCTTATTACTTTTCCAAAGATGAGAAACTTCTAGTCTATGACTACATGCAAGTAGGAAGCTTGTTTTACATGTTGCATGTAAACAGAGGCATGGGAAGAGCTCCATTAGACTGGGATTCAAGAATAAAGATTGCACTAGGAGCTGCAAAGGGAATTGCTTCCATTCACACTGATCACATGGACTCAAAACTCACTCATGGCAACATCAAGTCCTCCAATGTGCTCATAACTCAAGAACATGATGGCTGCATCACTGATGTAGGACTCACACCTATGATGACCACTCAATCAACCATGTCAAGGGCCAACGGCTACCGTGCTCCCGAAGTAACCGAGTACCGGAGGATCACTCAGAAGTCTGATGTTTACAGCTTTGGAGTACTCCTTCTAGAACTTCTCACTGGCAAGGCCCCACTTGGATATCCTGGCTATGAGGACATGGTTGATCTTCCAAGGTGGGTGAGGTCCGTGGTTCGCGAGGAATGGACGGCGGAAGTGTTTGATGAGGAACTGCTTAGAGGGCAATATTTTGAAGAGGAGATGGTGCAGATGCTTCAGATTGCACTGGCATGTGTGGCAAAGCTGGCAGATAATAGGCCAACAATGGATGAAACTGTTAGGAACATAGAGGAAATTAGGCTTCCGGAATTGAAGAACCGTAACACATCATCCGAGTCTGATTCTAATGTACAAACTCCATGA 1689 0.4417 MKFQLHAVPFVLLSFTVSLFGLIEADLNSDKQALLEFFSNVPHAPRLNWSLIPSSSSPKLIALDISSNNFSGSIPHTFQNLTRLTWLYLQNNSISGAIPHFNLPSLKYLNLSYNNLNGSIPNSINSFPYTSFVGNSHLCGPPLNNCSEASPPSSSPSSHSPVYQPLSPAATPQNRSATTTPKSYFGLATILALAIGGCAFISLLVLIFFVCCLKRNKSQSNGILTGKAPCAGKAEISKSFGSGVQEAEKNKLFFFEGCSYSFDLEDLLKASAEVLGKGSYGTTYRAALEDGTTVVVKRLREVLVGKREFEQQMEIVGRIGRHPNVIPLRAYYFSKDEKLLVYDYMQVGSLFYMLHVNRGMGRAPLDWDSRIKIALGAAKGIASIHTDHMDSKLTHGNIKSSNVLITQEHDGCITDVGLTPMMTTQSTMSRANGYRAPEVTEYRRITQKSDVYSFGVLLLELLTGKAPLGYPGYEDMVDLPRWVRSVVREEWTAEVFDEELLRGQYFEEEMVQMLQIALACVAKLADNRPTMDETVRNIEEIRLPELKNRNTSSESDSNVQTP 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1785 562 PANTHER LRR RECEPTOR-LIKE KINASE 5 50 - -
Aed3g1785 562 Gene3D Ribonuclease Inhibitor 29 152 IPR032675 -
Aed3g1785 562 SUPERFAMILY Protein kinase-like (PK-like) 273 537 IPR011009 -
Aed3g1785 562 SUPERFAMILY L domain-like 52 197 - -
Aed3g1785 562 Gene3D Phosphorylase Kinase; domain 1 235 344 - -
Aed3g1785 562 PANTHER OS05G0588300 PROTEIN 50 562 - -
Aed3g1785 562 ProSiteProfiles Leucine-rich repeat profile. 105 127 IPR001611 GO:0005515
Aed3g1785 562 Gene3D Transferase(Phosphotransferase) domain 1 345 560 - -
Aed3g1785 562 PANTHER OS05G0588300 PROTEIN 5 50 - -
Aed3g1785 562 Pfam Leucine rich repeat 57 94 IPR001611 GO:0005515
Aed3g1785 562 PANTHER LRR RECEPTOR-LIKE KINASE 50 562 - -
Aed3g1785 562 ProSiteProfiles Protein kinase domain profile. 269 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1785 562 ProSitePatterns Protein kinases ATP-binding region signature. 275 306 IPR017441 GO:0005524
Aed3g1785 562 Pfam Protein tyrosine and serine/threonine kinase 273 537 IPR001245 GO:0004672|GO:0006468
Aed3g1785 562 MobiDBLite consensus disorder prediction 149 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1785 Aed-Chr3 22413978 22417122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1785 52 560 Receptor kinase-like Gene Family AT5G58300 57.087 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed3g1785 PK_Tyr_Ser-Thr 1.9e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1785 - - gmx:100786974 913.294