Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1784 ATGGCCACCAACCAAGGCGTCCTCTCAACACTTGACAATGCCAAGACACAAAGCTACCACTTCAAGGCAATAGTGATAGCAGGGATGGGGTTCTTCACTGATGCATATGATCTTTTCTGCATAACTGCAGTCATCAAACTCATAGGTCGCTTGTACTACTATGACCCCAATAGTCATAGTCCAGGAAAGCTTCCAAAGAGTGTAAACAATGCAATAACAGGAGTTGCATTGTGTGGCACCCTCGCGGGGCAACTCTTCTTTGGCTGGCTGGGCGACAAACTCGGGCGCAAAAGGGTTTATGGCATAACACTTGTCACCATGGTGGGGTGTGCCTTGGCATCGGGCCTTTCCTTTGGCTCCACAGCCAAGAGTGTGGTTGTTAGTCTTTGCTTCTTCAGGTTCTGGCTAGGATTTGGCATTGGAGGAGACTATCCTCTCTCTGCTGTTATTATGTCTGAATATGCCAATCAAAAGACAAGAGGAGCTTTTGTTGCTGCTGTTTTTGCCATGCAAGGGGTTGGAATATTGGTTGCTGGAGGTGTGGCCATGTTGGTCTCCAAACTCTTCCTATTAGCCTATCCTGCCACAAATTTTGCAAAGGATCCCGTGCTATCCACGCAACCAGAAGGAGACTTTGTTTGGAGAATAGTGCTTATGTTTGGTGCATTTCCTGCAGCCTTGACTTACTACTGGAGAATGAAAATGCCAGAAACTGCAAGGTACACAGCCTTAGTGGAAGGAAATCACAAAAAAGCTGTTGAAGATATGGCAAGAGTTCTCGACAAAGATATACCTTTAGAGGAATCAAATGCCAGGGTTGCTGCTTCCACACCTAGCTCCTCTTATGGATTCTTCTCTTCAAAGTTTCTTGAAAAGCATGGCCTTCATTTGCTAGGAACAACCAGCACATGGTTCTTGTTGGACATTGCCTTCTACAGTCTTCAGCTAACACAAAAAGACTTTTACCCTGCAAGTGGACTTGTACCTAAGGCCTCCCAAATGAATGCTATAGAGGAGGTTTTTCAACTCTCCAAAGCAATGTTTACAGTGGCGCTGCTCGCCACAGTCCCTGGTTACTGGTGCACAGTGTATTTCATTGACAAGATTGGAAGGTACAAAATCCAACTTGCTGGATTTTTTGTGATGTCTGCTTGCATGTGGTTTTTGGGACTCAAATATGGAGAATTCAGGGGAGAGGAATGCAGCAGCCCAGATAGCAGATTTGAGTACTGTGGTGGAAACCTCCCTATGTTTATCCTTCTTTTTGGACTCACACTTTTCTTTGCAAACTTTGGACCCAATAGCACAACATTTATAGTGCCGGCAGAGCTGTTCCCTGCCAGGTTCCGTTCGACGTGCCATGGAATATCAGCAGCAGCTGGGAAAGCCGGAGCTATCATTGGTGCTTTTGTGGTGCAAAGCTATACAGATAATGCAGAAGACAAAATAAAAGGAATGAAGAAGGCACTTATGACACTCTCAGTTGTCAACTTGCTTGGATTCTTCTGCACTTTCTTAGTACCGGAAACACGAGGCCGGTCACTTGAAGAAATCTCCGGAGAAGATAAAGAAGTCCCTGGCAGTATTACTCAAGACAATGCAAATGAGACAACAACTAATACAGAAGAGGGAACAAAAAAATCTAATGTTGAGAAACCTCCAGAAACCTAA 1671 0.4494 MATNQGVLSTLDNAKTQSYHFKAIVIAGMGFFTDAYDLFCITAVIKLIGRLYYYDPNSHSPGKLPKSVNNAITGVALCGTLAGQLFFGWLGDKLGRKRVYGITLVTMVGCALASGLSFGSTAKSVVVSLCFFRFWLGFGIGGDYPLSAVIMSEYANQKTRGAFVAAVFAMQGVGILVAGGVAMLVSKLFLLAYPATNFAKDPVLSTQPEGDFVWRIVLMFGAFPAALTYYWRMKMPETARYTALVEGNHKKAVEDMARVLDKDIPLEESNARVAASTPSSSYGFFSSKFLEKHGLHLLGTTSTWFLLDIAFYSLQLTQKDFYPASGLVPKASQMNAIEEVFQLSKAMFTVALLATVPGYWCTVYFIDKIGRYKIQLAGFFVMSACMWFLGLKYGEFRGEECSSPDSRFEYCGGNLPMFILLFGLTLFFANFGPNSTTFIVPAELFPARFRSTCHGISAAAGKAGAIIGAFVVQSYTDNAEDKIKGMKKALMTLSVVNLLGFFCTFLVPETRGRSLEEISGEDKEVPGSITQDNANETTTNTEEGTKKSNVEKPPET 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1784 556 SUPERFAMILY MFS general substrate transporter 11 520 IPR036259 -
Aed3g1784 556 Pfam Sugar (and other) transporter 24 519 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aed3g1784 556 PANTHER PHOSPHATE TRANSPORTER 6 534 - -
Aed3g1784 556 CDD MFS_PhT 24 510 - -
Aed3g1784 556 MobiDBLite consensus disorder prediction 517 556 - -
Aed3g1784 556 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 512 IPR020846 GO:0022857
Aed3g1784 556 Gene3D MFS general substrate transporter like domains 19 263 IPR036259 -
Aed3g1784 556 Gene3D MFS general substrate transporter like domains 269 536 IPR036259 -
Aed3g1784 556 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 6 534 - -
Aed3g1784 556 MobiDBLite consensus disorder prediction 526 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1784 Aed-Chr3 22410448 22412118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1784 1 521 Inorganic Solute Cotransporters AT5G43350 61.959 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1784 K08176 - gmx:100820250 1017.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1784 3 22410448 22412118 Aed3g1784 3 22410448 22412118 ECH