Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1783 ATGGTTTCCTCTCAGTCCACAGAAGCAATCTTAAATGAAAATAGCTCACAGAAGCCTTTCCTGAATCACTTGCTTCTACCAAATGGACCACCTGATATTTTGCCTTCTTCGGATTGTGTTGATTTTGAATTTTCTGATGTGTTTGGACCATATCCTGTTGAAGGCTCAATTGCAGCAAGCTTTGAGAAACATGGAAATTCGGTAGCTACACGAGGTTCGAGTGAAAAAATTTACAGTGATCCTGATTGCATTCACATCCGGTCTCAATCTTTATTGGCTCCAACAACTTGTATTGGTAAGCTCACCTTACATGAGACAGAAGATGCATTGGATCTTGTGGAGGAGGTCTTTATGAAAACACATGAAGAACTTAAGGAACATTCTGTTAACATTGCTGCAGTGGAGGAAAAGGAAAACAATTTAAATTTCAGTGATTACTGTCTGAATAATCAGACCATTGGTGTTGAGGATTTTGAAGTGTTGAAGGTTGTTGGGCAAGGTGCTTTTGGTAAGGTGTATCAGGTGAGGAGGGAAGGCACTTGTGAAATATACGCTATGAAGACCAAATACAGGTTGTACCTTGTGCTAGATTTTGTCAATGGTGGCCACCTTTTCTTTCATCTCTATCAACAAGGCCTATTTAGGTATTATAAGCTGCATTCTGCAGTGTTAACAGATTTTGGCCTGGCTAAGCAGTTCAATGAGAATGAAAGGTCAAATTCTCTGTGTGGAACTGTAGAGTACATGGCCCCTGAAATTGTTATGGGAAAAGGCCATGATAAGGCAGCTGATTGGTGGAGTGTGGGAATTTTACTATATGAAATGCTTACAGGAAAGCCTCCTTTCTTTGGTGGAAATAGACATAAGATCCAGCAGAAGATAATTAAAGACAAAATCAAGCTCCCTGCCTTTTTGTCAAATGAGGCACATTCACTGTTGAAAGGGCTGCTGCAGAAAGATGTCAGCAAACGCCTTGGCAGTGGATCAAGAGGCAGTGATGAGATTAAAAGCCACAAGTGGTTTAAATCTGTCAATTGGAAGAAACTCGAAGGCCGTGAAATTAGGCCAAGCTTTGTCCCAGATGTTGCTGGGAAGCACTGTGTTGCTAACTTCGAGGAGCGGTGGACTAGCATGCCATTGCTGGATTCTCCAGCTGCTAGTCCCAAAAAGGATAACAATACAGTCAACAAGTTCTCATATAATGCCACTCCGGTTTTGTGA 1221 0.4152 MVSSQSTEAILNENSSQKPFLNHLLLPNGPPDILPSSDCVDFEFSDVFGPYPVEGSIAASFEKHGNSVATRGSSEKIYSDPDCIHIRSQSLLAPTTCIGKLTLHETEDALDLVEEVFMKTHEELKEHSVNIAAVEEKENNLNFSDYCLNNQTIGVEDFEVLKVVGQGAFGKVYQVRREGTCEIYAMKTKYRLYLVLDFVNGGHLFFHLYQQGLFRYYKLHSAVLTDFGLAKQFNENERSNSLCGTVEYMAPEIVMGKGHDKAADWWSVGILLYEMLTGKPPFFGGNRHKIQQKIIKDKIKLPAFLSNEAHSLLKGLLQKDVSKRLGSGSRGSDEIKSHKWFKSVNWKKLEGREIRPSFVPDVAGKHCVANFEERWTSMPLLDSPAASPKKDNNTVNKFSYNATPVL 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1783 406 ProSitePatterns Protein kinases ATP-binding region signature. 164 187 IPR017441 GO:0005524
Aed3g1783 406 SMART pkinase_C_6 342 402 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aed3g1783 406 Pfam Protein kinase domain 224 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1783 406 ProSiteProfiles Protein kinase domain profile. 1 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1783 406 PANTHER SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 222 403 - -
Aed3g1783 406 Gene3D Phosphorylase Kinase; domain 1 89 189 - -
Aed3g1783 406 Gene3D Transferase(Phosphotransferase) domain 1 222 361 - -
Aed3g1783 406 SUPERFAMILY Protein kinase-like (PK-like) 143 386 IPR011009 -
Aed3g1783 406 MobiDBLite consensus disorder prediction 387 406 - -
Aed3g1783 406 PANTHER SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 187 215 - -
Aed3g1783 406 PANTHER SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 1 187 - -
Aed3g1783 406 MobiDBLite consensus disorder prediction 382 406 - -
Aed3g1783 406 SMART serkin_6 158 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g1783 406 ProSiteProfiles AGC-kinase C-terminal domain profile. 342 406 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aed3g1783 406 PANTHER RIBOSOMAL PROTEIN S6 KINASE 187 215 - -
Aed3g1783 406 CDD STKc_AGC 164 341 IPR045270 GO:0004674|GO:0005524
Aed3g1783 406 PANTHER RIBOSOMAL PROTEIN S6 KINASE 1 187 - -
Aed3g1783 406 PANTHER RIBOSOMAL PROTEIN S6 KINASE 222 403 - -
Aed3g1783 406 Gene3D Phosphorylase Kinase; domain 1 362 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1783 Aed-Chr3 22407196 22409944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1783 1 404 AGC Kinase Gene Family AT3G08720 48.660 4.54e-142 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Aed3g1783 Pkinase 2.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1783 K04688 - gmx:100803509 635.95