Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1777 ATGGAAGTGAATCCAAACGCGGCCTCCATGCTGAGAACCAGAACTAAAATATTAATACCTTCTCCTCCACCGTTGCTCGCCCTGAATAAGAGGCTGCCGTCACCGTCACTGTCATCGTCACCGTCCATTACCCTGTCGGAACCAGTGAAATCCTCGTTCCACCGATTCCCTTTCTTCTCGAATCGTCATACTCTTCAAACCATGACGCTCTCCAAGTGCTTCTCTCACTCCGGGCCCACAGTCCCCATTTCGGATCCATCCAAACCCGAACCCGAACCCGAACCCGAATCGCCTCACACTCTCGTCGTGGTTTCCTTCTACAAGTTCGCGGATTTCCCCGACCACGCCCTCATGCGAAACCCCTTGAAGCAACTCTGTCAACGCCTGCGTGTTTCAGGTGGAATTATTCTTGCGCCTGAAGGGATCAATGGCAGCATATGTGGGACTCGGGAGTCGGTGGAGGAAGTTCTTGCATTTGTGGAGAGCGATGACCAGTTGAAGGGGCTAAGGCTGGTGGAATCGCCTGTTAGTCCTGAGGAGGAGGCCATCCATCATGGGCATAGTGCTGCTTCTCCTCTAGCTGCGGGGGAAGATGCGCCCTTCCGATGGGATCATGTGAGGGTCAAGTTGAAGAAAGAGGTAGCGTTTGGAAATGCCGAAAGAATGGACTGCTTTGTTGATTTTTTAATATTTGATAATATTGTCACTCTTGGGATGCCTGCTGTGTCGCCTATTGAAAGGGTTGGAAAGTATGTTGGCCCAGATGAGTGGAATGATTTGATTAGTGATCCAAATACAGTGGTAATTGACGTGCGGAATGGCTATGAAACCAGAATAGGAAAGTTTAAAGGAGCAGTTGATCCTTGTACTACATCATTTCGTGAATTCCCATCTTGGGTGGATGAGCATTTCCAGCTTACTGAAACAGAATATAGTAAGCATCCAAAAGTTGAGGTAAACAATTCAGTCCACCCTACTGAAAAAGAAAAGGAGAATAAAAAACAACATATGCCGCGTGTTGCAATGTATTGCACTGGAGGCATTCGATGTGAGAAAGCTACAAGTCTACTTCTCAGCAAAGGTTTCAAAGAGGTTTTTCACCTGGAAGGTGGAATTCTAAAATATCTCGAGGAGGTTCCAGAGGCAGAGAGCCTCTGGGAAGGGGAGTGCTTTGTTTTTGACAAACGAGTCTCTGTGGAGCATGGTTTGGTGCCAGGAAATTTCAAGCTCTGCTATGGTTGTAAGCAGCCCGTGAGTGATGCTGACATGGAAGCCCCGGAATTTGAATATGCAGTCACCTGTCCTCACTGTTTTGCACAGAAGTCAGATGAAGAGAAGGAAAGGGCTCGTGCTCGACAAAGACAATTTGAGAGATGGGGAATCATAGGTGGTCCAGATAGGGGTCACCGGCCAGCACACCAACCGGAAAGTACTAACACGGAACCAAACCAGCTTTCACGTTCTATTTAA 1470 0.4803 MEVNPNAASMLRTRTKILIPSPPPLLALNKRLPSPSLSSSPSITLSEPVKSSFHRFPFFSNRHTLQTMTLSKCFSHSGPTVPISDPSKPEPEPEPESPHTLVVVSFYKFADFPDHALMRNPLKQLCQRLRVSGGIILAPEGINGSICGTRESVEEVLAFVESDDQLKGLRLVESPVSPEEEAIHHGHSAASPLAAGEDAPFRWDHVRVKLKKEVAFGNAERMDCFVDFLIFDNIVTLGMPAVSPIERVGKYVGPDEWNDLISDPNTVVIDVRNGYETRIGKFKGAVDPCTTSFREFPSWVDEHFQLTETEYSKHPKVEVNNSVHPTEKEKENKKQHMPRVAMYCTGGIRCEKATSLLLSKGFKEVFHLEGGILKYLEEVPEAESLWEGECFVFDKRVSVEHGLVPGNFKLCYGCKQPVSDADMEAPEFEYAVTCPHCFAQKSDEEKERARARQRQFERWGIIGGPDRGHRPAHQPESTNTEPNQLSRSI 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1777 489 MobiDBLite consensus disorder prediction 449 489 - -
Aed3g1777 489 MobiDBLite consensus disorder prediction 475 489 - -
Aed3g1777 489 CDD RHOD_YceA 249 377 - -
Aed3g1777 489 Pfam Rhodanese-like domain 255 377 IPR001763 -
Aed3g1777 489 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 99 451 - -
Aed3g1777 489 Gene3D - 236 417 IPR036873 -
Aed3g1777 489 ProSiteProfiles Rhodanese domain profile. 262 384 IPR001763 -
Aed3g1777 489 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 229 410 IPR036873 -
Aed3g1777 489 Hamap tRNA uridine(34) hydroxylase [trhO]. 99 421 IPR020936 -
Aed3g1777 489 Gene3D - 91 215 - -
Aed3g1777 489 MobiDBLite consensus disorder prediction 76 98 - -
Aed3g1777 489 Pfam UPF0176 acylphosphatase like domain 102 214 IPR040503 -
Aed3g1777 489 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 99 451 IPR020936 -
Aed3g1777 489 SMART rhod_4 252 381 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1777 Aed-Chr3 22364873 22369240 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1777 100 489 Sulfurtransferasese or Rhodanese AT2G40760 70.153 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1777 - - gmx:100784854 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1777 3 22364873 22369240 Aed3g1777 3 22364873 22369240 ECH