Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1775 ATGAAGAAAAACATGCTTTGTATTACTACTCCTGAGAGTGAAGAAAGTGTTTCACCAAAGAAGAGATTAGTAATAATGGAAGAACTTGTTAAGGGTCAAGAAGCTGCTACTCAACTCAAGTTTCTTCTTGAAGAAGGGTCTTTATTGTCTTCTCAAGAGGAACTCATGGCCAATGTTCTCAGATCTTTCACACAATCTCTTTCTATCATTAACTCTTCTTCTTCTGCAGATTCCGGCGAAAATGGGTCACCGCCGGTGCCCGGTTCCTCCGATGAACTAACGTTCGGAGATTGCTGTCAGATCAGTAGGAAGAGATCTCAGAAGAAGACAGGAAGAGGTCACTACAATAGAAGGAGGAGTGCAGTGACATGGTCCACACTATCCTGCACCATTGATGATAATCATGCATGGAGGAAGTATGGACAAAAGCGAATCCTCAATTCTGAATTTCCTAGGAGTTACTACAGGTGCAGCCATAAGTATGATCGAGGTTGCCGAGCAACCAAACAAGTGCAGAGGGATCAAGAGAATCCGGAAATGTACCAAACTACGTACATTGGCAATCACACATGCAATGATGCCACCAACACCACCACAGATCTTCTGATCAATTCTGATCCTGATGACCACATTAGAACACCACAAGATCAATTTCCCAAAGAAGACACAACGAGTAATGCAGATAATATTGTGGATGGCCCAGGCTGGAATGGACTTTTTAATGATGAAGAGAGGTAA 738 0.4268 MKKNMLCITTPESEESVSPKKRLVIMEELVKGQEAATQLKFLLEEGSLLSSQEELMANVLRSFTQSLSIINSSSSADSGENGSPPVPGSSDELTFGDCCQISRKRSQKKTGRGHYNRRRSAVTWSTLSCTIDDNHAWRKYGQKRILNSEFPRSYYRCSHKYDRGCRATKQVQRDQENPEMYQTTYIGNHTCNDATNTTTDLLINSDPDDHIRTPQDQFPKEDTTSNADNIVDGPGWNGLFNDEER 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1775 245 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 9 239 - -
Aed3g1775 245 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 9 239 IPR044810 GO:0003700
Aed3g1775 245 Pfam WRKY DNA -binding domain 132 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g1775 245 SUPERFAMILY WRKY DNA-binding domain 129 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed3g1775 245 Gene3D WRKY domain 117 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed3g1775 245 ProSiteProfiles WRKY domain profile. 126 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g1775 245 MobiDBLite consensus disorder prediction 73 88 - -
Aed3g1775 245 MobiDBLite consensus disorder prediction 208 245 - -
Aed3g1775 245 MobiDBLite consensus disorder prediction 73 95 - -
Aed3g1775 245 SMART WRKY_cls 131 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1775 Aed-Chr3 22341790 22345395 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1775 21 211 WRKY Transcription Factor Family AT3G56400 41.624 1.34e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed3g1775 WRKY 1.6e-25 CL0274