Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1774 ATGAAAAACATCGTTTGTTCAGAAAGTGAAAGTGTCTCAGCCAGAAAGAAGAGAGTGATAACCGAAGAACTTCTCAAGGGTCAAGAAGCTGCTACTCAACTCAAGCTTCTTCTTGAAGAAGAGTCTTTATTGTCTTCTCACAAGGAACTCATGACCAACGTTCTCAGATCTTTCACACTATCTCTTTCTATCATTAACTCTTCTTCTGCAGATTCCGGCGAAAATGGGTCACCGCCGGTGGCCGATTCCGGCGAGAAGAGATCCCAAAAGGGAGGGAGAGGTTGCTACATTAGAAGAAAGAGTGCAGGGTCACGGAGCATACTTTCCTGCACCACTGATGATAATTATGCATGGAGGAAGTATGGACAAAAGAGAGTCCTCAATTCTGATTTTCCTAGCAAACAGGTGCAGCGGGATCAAGAGAATCCAGAAATGTACCGAACCACCTACATTGGAATTCACACATGCAGGGTGGATTCTCCTCATTCTACTACTACTTGGGAATCATCATGTCTTAATGATATTCAGGATCATCACCACCACAATAATATTAGCTCACCAACCTTAACTATAAAACAAACAGTATTTCCCAAACAAAACAACAACACATTAAGTGATGATGACATGTTGATGGTTTTGAAGCCATCCAATAAGCCTACAATTGAGCCCTTAAGGATGGAATCTGATACAGCCTCCCAATGTCTCGACATGGATTTTGGGTTGGCATCTGTTCATTTTGGCACTGATTTTCCCTCTGACCAACCCTACTTTCTTTAA 777 0.4221 MKNIVCSESESVSARKKRVITEELLKGQEAATQLKLLLEEESLLSSHKELMTNVLRSFTLSLSIINSSSADSGENGSPPVADSGEKRSQKGGRGCYIRRKSAGSRSILSCTTDDNYAWRKYGQKRVLNSDFPSKQVQRDQENPEMYRTTYIGIHTCRVDSPHSTTTWESSCLNDIQDHHHHNNISSPTLTIKQTVFPKQNNNTLSDDDMLMVLKPSNKPTIEPLRMESDTASQCLDMDFGLASVHFGTDFPSDQPYFL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1774 258 Pfam WRKY DNA -binding domain 113 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g1774 258 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 4 132 - -
Aed3g1774 258 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 134 236 - -
Aed3g1774 258 MobiDBLite consensus disorder prediction 68 95 - -
Aed3g1774 258 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 4 132 IPR044810 GO:0003700
Aed3g1774 258 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 134 236 IPR044810 GO:0003700
Aed3g1774 258 SUPERFAMILY WRKY DNA-binding domain 111 158 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed3g1774 258 ProSiteProfiles WRKY domain profile. 113 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g1774 258 Gene3D WRKY domain 101 159 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed3g1774 258 SMART WRKY_cls 112 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1774 Aed-Chr3 22334672 22338610 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1774 17 202 WRKY Transcription Factor Family AT2G40750 30.418 3.43e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed3g1774 WRKY 0.00026 CL0274