Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1772 ATGAAAAAGAACAACCTTTGTGCTGAAAGTGAAAGGGATGTCTCAGTGAAGAAGAAAAGTGTGATAATCAAAGAGCTTGTTAAGGGTCAGAAATCTGCTACTCAACTCAAGATTCTTCTTGAGAAGAACCCCTTTGGGAGTAAAGGGTCTTTCTGTTCTTCTGAGGAACTCATGGCCAATATGCTCAGATCTTTCACAGAATCTCTTTCTATTTTAAACTCTTCTTCTTCTGCAGATGAGGTGGCTCCTCATCGGAATTCCGACAAAAATGTGTCGCCGGTGACCGGAAGGGTAGTGCAGTGTCATGGAGCAATATTTGTAATTTTTCACAGATGCAATATTTTGAGGAGTGCAGTGACATGGTCCACACTATCCTGCACCATTGATGATAATCATGCATGGAGGAAGAGTTACTTCAGGTGCAGTCACAAGTATGATCGAGCTTGTGGAGCAACGAAACAGGTGCAGGTGCATCAAGAGAATCCGAATATGTACCAAACTACGTACATTGGACATCACACATGCATTAATAATAATAATGGCACCACCCCAATGGCTACACAACATTATTCAACCATAGCAGGTTCTAGTAGTTCTACTGCATCTGCATGGGAATCATATCTTCTGAATTTGGATCATGATTCACCCAATAAGGTACCAAATATTGTGCAAGATGATATTAACTCATCACCAAGCCGAAGTGCTGTAAAACAAGGATTTTCCAAAGCTAGTGATGTTACAGATCATCATCAGCAGCACATGTTGGATCCTAACTTGTGGTCAGATTTGAAGGATTCTCAACCATTCAAGCCTACCATTATGCCCTTAAAGATGGAAGAATCTCATAATAATAATAATGCGTATTCATGTATAGATTCTCAACGTCTGGACATGGATTTTGAGGTGCCATCTATTCATTTTGACACTGATTTGTTCCACTTTGACTAG 948 0.4019 MKKNNLCAESERDVSVKKKSVIIKELVKGQKSATQLKILLEKNPFGSKGSFCSSEELMANMLRSFTESLSILNSSSSADEVAPHRNSDKNVSPVTGRVVQCHGAIFVIFHRCNILRSAVTWSTLSCTIDDNHAWRKSYFRCSHKYDRACGATKQVQVHQENPNMYQTTYIGHHTCINNNNGTTPMATQHYSTIAGSSSSTASAWESYLLNLDHDSPNKVPNIVQDDINSSPSRSAVKQGFSKASDVTDHHQQHMLDPNLWSDLKDSQPFKPTIMPLKMEESHNNNNAYSCIDSQRLDMDFEVPSIHFDTDLFHFD 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1772 315 ProSiteProfiles WRKY domain profile. 110 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g1772 315 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 5 303 IPR044810 GO:0003700
Aed3g1772 315 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 5 303 - -
Aed3g1772 315 SMART WRKY_cls 128 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g1772 315 Gene3D WRKY domain 116 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed3g1772 315 Pfam WRKY DNA -binding domain 130 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed3g1772 315 SUPERFAMILY WRKY DNA-binding domain 126 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1772 Aed-Chr3 22329198 22331683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1772 13 184 WRKY Transcription Factor Family AT3G56400 32.995 3.75e-18 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed3g1772 WRKY 3.5e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1772 - - gmx:100796071 285.419