Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g1760 ATGGATTCCCGCGACTCCTCCCCTCACTCCCGCGACGGCGACAACCACCACCACCACCGTCAGCCTTCCTTCGACGACCCTCCTCCGAAGGTGAAGCTGATGTGCAGCTTCGGCGGGCGCATCCAGCCCCGCCCCCACGACAACCACCTCACCTACGTCGCCGGCGACACCAAGATCCTCGCCGTGGACCGCCACGTGAAATTCCCCTCCCTCATCGCAAAACTCTCATCCCTCGCCAACGCCCCCGCGAACCACTCCTTCTTCAAGTACCAGCTCCCCGGCGAAGACCTCGACGCCTTAATCTCCGTCACCAACGACGACGACCTCCACCACATGATGCTCGAGTACGATCGCCTCACCCGCGCTTCACCTAGACCCGCGCGCCTCCGCCTCTTCCTCTTCCCCCTCCTCCACCACAACAACAACAATTTCGCTCCCGCTGAATCCAAAACCGAGCGCCAATGGTTCGTTGACGCTCTCAATTCCGTTCACGTTCCAGAAGATTCCCCACCGCCGCCTCTGCCGCTGTCAAATCCAGATTTTCTGTTCGGTCTCGACAAGCCGGCGGCGGCGGATGATGCTCCAGCGAAGAGTTCGGCGCCGGAATCGGAGTGCTTCCCCGAGGATCGCGAACCCGAGCACGAGATTCAGGAGATGCGGAGAATGCAGATTGAAAACAACAACAGCAACAACCACAACAACAATGAGCAACTTTTTCTGCAACGGAAAATGAAAATAGAGGAAGATAACGAAAACGGTAGGGTTTACGGTGTTAATGGAAATGGAAACGGAAACGGAGACTGTTTCGCTCAGAAAAACACGGAGAATGTGACGCCGTTAGTGGCGCAAGTTGTTCATCAAGGTTCGGTTACTGGAACGGTGTCGTTTATGCAGGAGAGGAATAACGCGGGTTATTCGCTGGCGGTTCCTACTACGGGGAATGAGATTTTTCTCATTCAGACGCCTTCTGGAGTCTTCCAAGCGGTTCGCCCCGTCACTGGACCGATGGGCCAACCGGTTTATCTCGTTCACGCGCCCGGTTCGGTTGGATACAACGGTTCGGAGGCTGCTGTGGCGGCGGGACGCGGCGCCGCGCGGTGGTGA 1104 0.577 MDSRDSSPHSRDGDNHHHHRQPSFDDPPPKVKLMCSFGGRIQPRPHDNHLTYVAGDTKILAVDRHVKFPSLIAKLSSLANAPANHSFFKYQLPGEDLDALISVTNDDDLHHMMLEYDRLTRASPRPARLRLFLFPLLHHNNNNFAPAESKTERQWFVDALNSVHVPEDSPPPPLPLSNPDFLFGLDKPAAADDAPAKSSAPESECFPEDREPEHEIQEMRRMQIENNNSNNHNNNEQLFLQRKMKIEEDNENGRVYGVNGNGNGNGDCFAQKNTENVTPLVAQVVHQGSVTGTVSFMQERNNAGYSLAVPTTGNEIFLIQTPSGVFQAVRPVTGPMGQPVYLVHAPGSVGYNGSEAAVAAGRGAARW 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g1760 367 Pfam PB1 domain 47 135 IPR000270 GO:0005515
Aed3g1760 367 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 2 342 - -
Aed3g1760 367 MobiDBLite consensus disorder prediction 186 210 - -
Aed3g1760 367 Gene3D - 51 135 - -
Aed3g1760 367 MobiDBLite consensus disorder prediction 1 31 - -
Aed3g1760 367 CDD PB1_UP2 34 125 - -
Aed3g1760 367 MobiDBLite consensus disorder prediction 1 26 - -
Aed3g1760 367 SUPERFAMILY CAD & PB1 domains 46 135 - -
Aed3g1760 367 PANTHER OS05G0427100 PROTEIN-RELATED 2 342 - -
Aed3g1760 367 SMART PB1_new 45 136 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g1760 Aed-Chr3 22186974 22188077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g1760 25 163 MAP Kinase Kinase Kinase AT5G57610 42.759 6.23e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g1760 - - gmx:100792391 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1760 3 22186974 22188077 Aed3g1760 3 22186974 22188077 ECH